Floricoccus penangensis: KIW23_03945
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Entry
KIW23_03945 CDS
T08197
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
fpen
Floricoccus penangensis
Brite
KEGG Orthology (KO) [BR:
fpen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpen03019
]
KIW23_03945
03009 Ribosome biogenesis [BR:
fpen03009
]
KIW23_03945
Enzymes [BR:
fpen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KIW23_03945
Messenger RNA biogenesis [BR:
fpen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KIW23_03945
Ribosome biogenesis [BR:
fpen03009
]
Prokaryotic type
rRNA helicases
KIW23_03945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
URZ88196
LinkDB
All DBs
Position
828649..829989
Genome browser
AA seq
446 aa
AA seq
DB search
MKFTDFNLKPFINKTLEDINFKETTEVQEKIIPLILKGRDVVGESKTGSGKTHTFLIPIF
QKINPESDTVQAVITAPSRELATQIYNEAMKFVANDDRIRVVNYVGGTDKNRQIEKLANN
QPHLVIGTPGRVLDLINAQALKTYTANTYVVDEADMTLDMGFLTDVDKIASTFDKKVQML
VFSATIPQKLQPFLKKYLNNPVIEKIASKTVISDTIDNWLISTKGKSNNNQLLEIVKTIN
PYLAMIFANTKERADEIHSFLVNNGLKVAKIHGGVAPRERKRIMKAVQNLDYQYVVATDL
AARGIDIEGVSHVINDAIPRDLEFFVHRVGRTGRNGLSGTAITLYAPSDDSAIRDLEKMG
IKFSPKVIKNGEIVDTYDRDRREKREKTKKELDPTMIGLVKKKKKKIKPGYKKKIGWVLD
ERNKKQRRQEQKARGRAERKAKKQNF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagattttaacttaaaaccatttattaataagacactagaggatattaac
tttaaagaaacaactgaagttcaagaaaaaattattcctttgattttgaaaggaagagat
gttgttggagaatctaagacaggtagtggtaaaactcatactttcttaatacctattttc
caaaaaattaatcctgaatcagacactgtgcaagcagttattactgcaccaagtcgtgaa
cttgcaactcaaatttataatgaggctatgaagtttgttgcaaatgatgaccgtattcgt
gtagttaactatgttggtggaactgataaaaatcgtcagattgaaaaattagcaaacaat
caaccacatttagttattggaacaccaggtcgcgtacttgatttaatcaatgcacaagcc
ttaaagacttacactgcaaacacatatgtagttgatgaagcagatatgactttagatatg
ggattcttaactgatgtagacaagattgcgtcgacttttgataaaaaagttcaaatgcta
gtcttctcagcaacaattccacaaaagttacaaccatttttgaagaaatatttaaataat
ccagtaattgaaaagattgcaagtaagactgttattagtgatacaatcgataattggtta
atttctacaaaaggaaaaagcaataataatcaattattagaaattgttaaaactattaat
ccatatttagcaatgatttttgctaatactaaagagcgtgcagatgaaattcattctttc
ttagttaataacggattaaaagtagctaaaatccatggtggtgttgctccgcgtgaacgt
aaacgcatcatgaaggctgttcaaaatctagattatcaatatgttgttgctactgacctt
gcagcacgtggtattgatattgaaggtgtaagccatgtaattaacgatgcaattccacgt
gatttagaatttttcgttcatcgtgttggtcgtacaggtagaaatggtctatcaggtaca
gcaattaccttatatgcaccaagtgatgactcagcaattcgtgatcttgaaaaaatggga
atcaagttttctcctaaagtaataaaaaatggagaaattgttgatacttatgatcgtgat
cgtcgtgaaaaacgtgaaaaaactaagaaagaacttgatccaacaatgattggtcttgtt
aagaaaaagaagaaaaaaattaaaccaggatataagaaaaaaattggctgggtacttgat
gaacgaaataaaaaacaacgtcgtcaagaacaaaaagcacgtggtcgtgctgaacgtaaa
gctaaaaaacaaaacttttag
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