Floricoccus penangensis: KIW23_06495
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Entry
KIW23_06495 CDS
T08197
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
fpen
Floricoccus penangensis
Pathway
fpen02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fpen00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KIW23_06495 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpen03021
]
KIW23_06495 (rpoD)
Transcription machinery [BR:
fpen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KIW23_06495 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DBD_HTH
DUF6432
Motif
Other DBs
NCBI-ProteinID:
URZ86739
LinkDB
All DBs
Position
complement(1370749..1371858)
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AA seq
369 aa
AA seq
DB search
MTTKNNKKEVTSVDVAVAEYIRSHKAEGTVVDDELTTELIAKLELEADQIDDVLQKIQDA
GISIVDKEGNPSAMALKDDPSLEEDDEDLTAAAGVKIDDPVRMYLKEIGRVPLLTMEEET
ALAEAIAAGDEQAKQHLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDHT
KGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPTPEE
IGKEMDMAPDKVREILKIAQEPVSLETPIGEEDDSRLGDFIEDEVIENPVDHTTRVILRE
QLDEVLDTLTDREENVLRLRFGIDDGKMRTLEEVGKVFDVTRERIRQIEAKALRKLRHPS
RSKQLKDFL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
ttgacaactaaaaataacaaaaaagaagtaactagtgttgatgtagcggtagcagagtat
attcgtagtcacaaagcagaaggaactgttgttgatgatgaacttacaacagaactgatt
gctaaacttgaacttgaagcagaccaaatagatgacgttctacaaaaaattcaagatgca
ggtatctctattgtcgataaagaaggtaatccaagtgcaatggcacttaaagatgatcca
agtcttgaggaagacgacgaagatttaacagctgcagctggtgttaaaattgacgatcca
gttcgtatgtaccttaaagaaattggtcgtgtacctctacttacaatggaagaagaaact
gcacttgcagaagcaattgctgcaggtgatgaacaagccaaacaacacttagctgaagca
aatttacgtttagttgtaagtattgcaaaacgatatgttggtcgtggtatgcagttctta
gatcttatccaagaaggtaatatgggtctaatgaaagcagtagaaaaatttgatcataca
aaaggattcaaattctctacatatgctacttggtggatccgtcaagcaattacacgtgca
atagctgaccaagcaagaacaatccgtattccagtgcatatggttgaaactattaataag
ttaattcgtattcaacgtcaattacttcaagatttaggccgcgaacctactccagaggaa
attggtaaagaaatggacatggctccagataaagtacgtgaaatattaaagattgctcaa
gaaccagtaagtctagaaacacctatcggagaagaagatgatagtcgccttggtgatttt
atagaggatgaggtaattgaaaacccagttgatcacactactcgtgtaattttacgtgag
cagttagatgaagttctagataccttaacagatcgtgaagaaaatgtccttcgtttacgt
tttggtattgatgatggtaaaatgcgtactcttgaggaagttggaaaagtttttgatgta
acgcgtgaacgtattagacaaattgaagcaaaagcattaagaaaactccgtcatccaagt
agaagcaaacaacttaaggatttcttataa
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