Floricoccus penangensis: KIW23_08160
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Entry
KIW23_08160 CDS
T08197
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fpen
Floricoccus penangensis
Pathway
fpen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KIW23_08160 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpen03019
]
KIW23_08160 (pnp)
03016 Transfer RNA biogenesis [BR:
fpen03016
]
KIW23_08160 (pnp)
Enzymes [BR:
fpen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KIW23_08160 (pnp)
Messenger RNA biogenesis [BR:
fpen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KIW23_08160 (pnp)
Transfer RNA biogenesis [BR:
fpen03016
]
Prokaryotic type
tRNA degradation factors
KIW23_08160 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
PCB_OB
KH_2
DUF1949
S1_2
KH-I_KHDC4-BBP
S1_RRP5
SPATA25
RNase_Zc3h12a_2
Motif
Other DBs
NCBI-ProteinID:
URZ87047
LinkDB
All DBs
Position
complement(1704558..1706735)
Genome browser
AA seq
725 aa
AA seq
DB search
MSKKTFEMEFYGRPLVVEVGQVAKQANGAAVVRYGETTVLTAATMSKQMKDGDFFPLQVN
YDEKMYASGKFPGGFNKREARPSTEATLNARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
NATAAMTAMFGSSLALSISDIPFNGPIAGVEVGYVNGEIIINPTAEQKENSLLNLSVAGN
RDAINMVESGAKELSEEIMLEALLKGHEAVVELIEFQDKIVAEVGVEKADVELLQVDADL
QAEIVAKYNDDLQKAVQVEEKLAREDATNEVRARAIEEYEEKFAEDENKVRLMREVNEIL
EIMEHTEVRRLITEDKVRPDGRKIDEIRPLDAEIDFLPQVHGSGLFTRGQTQALSVLTLA
PMGEAQTIDGLDDEYKKRFMHHYNFPQYSVGSTGRYGAPGRREIGHGALGERALEQVMPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGENYTV
LTDIQGLEDHFGDMDFKVAGTREGITALQMDIKIDGITPQILTEALAQAKRARFEILDVI
EATIPAPRPELAPTAPKIETIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEDGLVAI
FSSDAAAIARAKEIIEELVRVAKVGDVYEAKVQRVEKFGAFVNLFGNVGALLHISELDWA
KTDKVEDVVNIGDVVKVKVIKIDDRGRIDVSRKRLLPRPERPAKPKTEEKSDVVKAAEKA
EEKQD
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaaaacttttgaaatggaattttatggtcgtcctctagttgttgaggttggt
caagttgctaaacaggctaatggagcagcagtagttcgctacggtgaaactacagttctt
acagcagcaacaatgagcaaacaaatgaaagatggagatttcttccctcttcaagtaaat
tatgacgaaaaaatgtatgcctcaggtaaattccctggaggatttaacaaacgtgaagca
cgcccttcaacagaagcaactttaaatgctcgtttgattgaccgtccaattcgtccaatg
ttcgcagaaggattccgtaatgaagtgcaagttatcaacacggtactttcatatgatgaa
aatgcaacagcggcaatgacagctatgtttggttcgagcttggctctatcaatttctgat
atcccattcaacggtccaatcgctggtgttgaagtagggtacgtcaatggcgaaattata
attaacccaactgctgaacaaaaggaaaatagccttttaaatctatcagtagcaggtaat
cgagatgctatcaacatggtagaatctggagccaaagaactttctgaagaaattatgcta
gaagcccttttaaaaggtcatgaagcagttgttgagttgattgaattccaagataaaatc
gttgctgaagtgggagttgaaaaagcagacgtagaacttctacaagttgatgcagattta
caagcagaaatcgttgctaaatacaatgacgatttgcaaaaagcggttcaagttgaagaa
aaattagctcgtgaagatgcaacaaacgaagttcgtgctcgcgcgattgaagaatatgaa
gaaaaatttgcagaagatgaaaataaagttcgtttaatgcgcgaagtaaatgaaattctt
gaaatcatggaacatacagaagttcgtcgtcttatcacagaagacaaagttcgccctgat
ggtcgtaaaattgatgaaattcgtccactagatgccgaaattgatttcttaccacaagta
catggttcaggtctatttacacgtggacaaactcaagctttatcagtattaacgcttgct
ccaatgggagaagctcaaactatcgatggacttgatgatgaatacaaaaaacgcttcatg
caccattataacttcccacaatattcagtaggttctactggtcgttatggtgctcctgga
cgtcgtgaaattggacatggtgcactaggtgaacgtgctcttgaacaagttatgccaagt
ctggaagaattcccttatgctattcgcttagttgctgaagtattggaatcaaatgggtca
agttcgcaagcctctatttgtgccggaactcttgctttaatggctggtggtgtgcctatc
aaagcacctgtagcaggtattgcaatggggcttatctctgatggtgagaactatactgtt
ttaactgatattcaaggtttagaagaccactttggcgatatggactttaaggttgcagga
actcgtgaaggaattactgcccttcaaatggatattaagattgatggtattactcctcaa
attttaactgaagctctagcacaagctaagagagcaagatttgaaattcttgatgtaatt
gaagctacaatcccagctcctcgtcctgaacttgcaccaactgctcctaagattgaaaca
atcaagattgatgttgataagattaagattgttatcggtaaaggtggagaaacaattgat
aagattatcgcagaaactggcgttaaaattgatattgatgaagatggacttgttgcaatc
ttctctagcgatgcagcagcaattgcacgtgctaaagaaatcattgaagaacttgttcgt
gttgctaaggttggcgacgtctacgaagctaaggtacaaagagttgaaaaattcggtgct
ttcgtaaatctatttggaaatgtaggagctctacttcatatttctgaattagattgggct
aaaactgataaagttgaagatgtggtaaatattggtgatgtggtaaaagttaaggttatt
aaaattgatgaccgtggacgtattgatgtaagtcgtaaaagattactaccaagacctgaa
agaccagctaagccaaaaacagaagaaaaatcagatgttgtaaaagctgctgaaaaagct
gaagaaaaacaagattaa
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