Francisella persica: ACH24_00235
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Entry
ACH24_00235 CDS
T04357
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fper
Francisella persica
Pathway
fper03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fper00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACH24_00235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fper03021
]
ACH24_00235
03400 DNA repair and recombination proteins [BR:
fper03400
]
ACH24_00235
Enzymes [BR:
fper01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACH24_00235
Transcription machinery [BR:
fper03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACH24_00235
DNA repair and recombination proteins [BR:
fper03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACH24_00235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ALB01266
UniProt:
A0AAC8VCU7
LinkDB
All DBs
Position
53116..57369
Genome browser
AA seq
1417 aa
AA seq
DB search
MNNSILHQNYNSKKFDIIKISLASPEVIRSWSHGEVKKPETINYRTFKPERDGLFCAKIF
GPIKDYECLCGKYKRLKHRGVVCERCGVEVEQAKVRRERMGHIDLICPVVHIWYLKSLPS
RIGLFLDMPLKNVEKVLYFESYIVTDPGLTPLEKKQLLTDEEYAEALESYGYEFEASMGA
EAIRDLLADTDIESEIELLQAEYEDSKSTVKKEKAIKRLRLLETFQASGNKPEWMVMTVL
PVLPPDLRPLVPIEGGRFATSDLNDLYRRVINRNNRLKKLLDLNAPDIIVRNEKRMLQEA
VDALLDNGRRGRAVTGANKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPSLR
LYECGLPKKMALELFKPFVYSKLRLGGHATTIKQAKRMVELEEAVVWDILETVINEHPVL
LNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTVESQLEARV
LMMSTNNILSPASGQPIITPTQDIVLGLYYITREKEDARGDGKLFSSYEDVSRSYNSGTI
DIHAKIKLRIDRQVFDTKGNTYNEKGVVTTTVGRALLLNILPEGLSFSLLNKVLVKKEIS
KIIKQAFRVLGGKATVVLADKLMYAGFKYSTLSGVSVGVDDMTIPDNKEAKIEEAEKEIK
HITEQYQSSLITENERYNNIINIWSKTSDEVGASMMDAISKDTLIVNGNKKEIESFNSVY
MMAKSGARSSYNQMRQLAGMRGLMAKPDGTMIETAITANFREGLSVLQYFTSTHGARKGL
ADTALKTANAGYLTRRLVDVAQDLVVIEEDCGTDDGLMFSAIVEDGEVKVPLAERTLGRT
LAADVVTEKGVVLLEAGTLLDENLVELLDDNGIDMIKIRSPITCKTRRGLCAKCYGRDLA
REKQVNVGESVGVIAAQSIGEPGTQLTMRTFHTGGAASLGITVSDIKVKTAGKIKFKNIR
TVTNKEGQEIVISRAGEIIVSDTMGRVREQHKIPMGATVPLASGKAVEIGDVIATWDPHA
QPLITDVAGKVVLEDVIDGITSKHTYDDLTGQQTIEITSISQRTTSKNLKPVVKVVDEKG
NELKSIPLSVGAVLNVTDDFNLKVGDVVAKIPLEGSKNKDITGGLPRVAELFEARRPKDA
AILSPCDGMVRLGNRDTKEKQRIEIIDKNGHIVEEILLPKSRHLVVFDGEQVSMGDVLAD
GPTDPHDLLKYKGLEEFADYILIEAQSVYRMQGVVINDKHIETIVRQMLRKAVILDEGDS
KFVKEENVELVRILEENDKLSKQGKKAVEYELVLMGITRSSLSTESFLSAASFQETTRVL
TEASINSQIDNLRGLKENVLIGRLIPTGTGLAVRKESAKIEKMREELGVEDNMTFTDLSS
LNPEEISFESTQSEKEDKDINEDIEESLRNALESLDF
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
gtgaataacagtatcctacatcaaaattacaatagtaaaaagtttgatattattaaaata
tctctagcatctcctgaggttattcgttcatggtctcatggtgaagttaaaaaaccagaa
actataaactataggacatttaagcctgagagagatggattattctgtgctaagatattt
ggacctataaaagactatgagtgcttatgtggtaagtataaaagacttaagcaccgtggc
gtagtatgtgagcgctgtggtgttgaagtggagcaagctaaagtaagaagggaaagaatg
ggacatattgatttaatatgtcctgttgtgcatatttggtatctaaagtctttaccttct
agaataggtttattcttagatatgccattaaagaacgttgaaaaggttttatactttgag
tcgtatatagttactgaccctggtttgactccattagaaaaaaaacaacttcttacagat
gaggagtatgctgaagcgctagaaagctatggctatgagtttgaagcgtcgatgggcgct
gaagctataagagatttattagcggatactgatattgagtcagagattgagttacttcaa
gctgagtatgaagatagtaaatctacagttaagaaagaaaaggctatcaagagattaaga
cttcttgagactttccaagcttctggtaataaacctgagtggatggttatgactgtattg
cctgtattaccaccagatttaagaccattggtgccgattgaaggtggtaggtttgcaact
tctgatcttaatgatttatatcgtcgagtaatcaatagaaataataggcttaaaaagcta
ttagacctaaatgctcctgatatcattgttagaaatgaaaaaagaatgttacaagaagca
gtcgatgctttattagataatggtagacgtggtagagcagtaacaggtgctaacaagaga
ccacttaaatcactagctgacatgattaaaggtaagcaggggcgtttccgtcaaaactta
ttaggtaagcgtgttgactactctggtcgttcggtgattacagtaggtccatcacttagg
ctatatgagtgtggtttacctaagaagatggcactggagttatttaagccatttgtatat
tctaagctaagattaggtggtcatgcaacgactatcaaacaggctaagagaatggttgaa
ctagaagaggcagtagtatgggatattctcgagactgtaattaatgagcacccagtgtta
ttaaaccgtgctcctacattacatagactaggtattcaagcatttgaacctaagcttatt
gaaggtaaggctatacagttacacccattagtttgtgcggcatttaatgctgactttgat
ggtgaccaaatggctgtacacgtaccgctaacggttgagtcacaattagaagctagagta
ttaatgatgtcaacaaataacatcttatcacctgcatctggtcaaccgattattactcct
actcaggatattgtattaggtctgtactatataactagagagaaagaagatgcgcgtggt
gatggtaaattattctctagttatgaggatgtaagtagatcctacaactcaggaactata
gatatccatgctaagataaagctaagaatagatagacaagtatttgatactaaaggtaat
acatataatgaaaaaggtgtagtcactactactgttggtagagcacttttactaaatata
ctacctgaaggtttatctttctctttactaaacaaagtgttagttaagaaagaaatttct
aaaattatcaagcaagcatttagagttttaggtgggaaggccacggtagttttagctgat
aaattgatgtatgcaggttttaaatattcaacattatcaggtgtatctgttggtgttgat
gatatgactatccctgataacaaagaagctaaaattgaagaagcagaaaaagagattaag
cacattactgaacagtatcaatcttcattaattactgaaaatgagagatataataatatt
atcaatatttggagtaaaacttctgatgaggttggagcttcgatgatggatgcgatatct
aaagacactcttatagttaatggcaataaaaaagaaattgagtcatttaactctgtatat
atgatggctaaatcaggtgcaaggagttcttataatcagatgagacagcttgcgggtatg
cgtggtctaatggcaaaaccagatggtactatgattgagactgcaattacggcaaacttt
agagaaggtctgtcagtattgcagtattttacatctacgcatggtgcgcgtaaaggtcta
gctgatacggctcttaagacagctaatgcaggttatttaactcgtagattagttgatgtt
gctcaagatttagttgttattgaagaagattgtgggactgatgatggtttaatgttctca
gctattgttgaggatggtgaagttaaagttcctctagcagagcgaactttgggaagaact
ttagcggcagatgttgttactgaaaaaggagttgtgttactcgaagcaggtactctatta
gatgaaaatcttgttgagttgcttgatgataatggtattgatatgatcaagatcagatct
ccaataacttgtaaaacgcgtagaggattatgtgctaagtgttatggtcgtgatctggct
cgtgagaaacaagttaatgttggtgaatctgttggcgtgattgcagcacaatcaattggt
gaaccaggaacacagttaacgatgagaacatttcatacaggtggtgctgcttctctaggt
attacagtttctgacatcaaagttaagactgctggtaagattaagtttaaaaatattaga
actgtaaccaataaagaaggtcaagaaattgttatatcacgcgccggtgagattattgtt
tctgatactatgggtagagtaagggaacagcataagatccctatgggcgctactgttcct
ttagcgagtggtaaagctgttgaaattggtgatgtgattgctacatgggatccgcatgct
cagccgttaataactgatgtggctggtaaagttgttcttgaagatgtcatagatggtata
acatctaagcatacttatgatgatctaactggtcagcaaactattgaaataacttcgata
tcacaaagaacaacatctaagaacttaaaaccagtagttaaagttgttgatgaaaaaggt
aatgagcttaaatcaatacctttatcagttggtgcggtgttaaacgttactgatgacttt
aatctcaaagttggtgatgtcgtggctaagatccctctagaaggttctaagaataaagat
attactgggggccttccacgtgttgctgagcttttcgaggctagacgtcctaaggatgct
gctatactttctccatgtgatggtatggttaggcttggaaacagagacactaaagagaaa
cagagaattgagattatagataagaatggtcatattgttgaagaaatattactacctaaa
tctcgtcatctagtagtttttgatggtgaacaagtttccatgggtgatgttttagctgat
ggacctactgatccacatgatcttcttaagtacaaagggcttgaggaatttgctgattat
atccttattgaagcacagtctgtgtatcgtatgcagggtgttgtgatcaatgataagcat
attgagacaattgtaagacaaatgttgagaaaagctgtaattcttgatgagggtgatagt
aaatttgtcaaagaagaaaatgttgaactagtaagaattcttgaagagaatgataaactg
agtaagcaaggtaaaaaagcagtcgagtatgagcttgtactgatgggtattacacgctct
tctttatctacggaatcattcttgtcagctgcttctttccaagaaacaacaagggtactt
actgaggcttcgataaattcgcagattgataatttaagaggacttaaagaaaacgttctt
atcggtagattaataccaacaggtactggtttagcagtaagaaaagagtcagctaaaatt
gaaaaaatgcgtgaagagttaggagttgaggataacatgacgtttactgatttatcatct
ttaaatcctgaagaaatttcttttgagagtactcaatctgaaaaagaagataaagatatt
aatgaagatattgaagagtcattaagaaatgctcttgagtctttagatttctaa
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