Francisella persica: ACH24_02300
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Entry
ACH24_02300 CDS
T04357
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fper
Francisella persica
Pathway
fper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACH24_02300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fper03019
]
ACH24_02300
03009 Ribosome biogenesis [BR:
fper03009
]
ACH24_02300
Enzymes [BR:
fper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACH24_02300
Messenger RNA biogenesis [BR:
fper03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACH24_02300
Ribosome biogenesis [BR:
fper03009
]
Prokaryotic type
rRNA helicases
ACH24_02300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
AAA_30
Utp25_C
SNF2-rel_dom
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ALB01581
UniProt:
A0AAC8VDF1
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All DBs
Position
complement(551464..553173)
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AA seq
569 aa
AA seq
DB search
MNSETKKDFNQLGLSKDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAA
FALPLINKIDLKSKDKSPQVLVLAPTRELAIQVAEQFEAFAENVPNLDVACIYGGQEYGS
QIRALKRGVKVVVGTTGRVMDHIEKGTLELDNLRALVLDEADEMLRMGFINDVRFVLSHI
SDQCQRLLFSATIPTDIANIIEEYLRNPCKIQVKAKTKTANTVTQKFIVIKGFRKIDALD
RLLETEETDGVIIFVKTKNSTIEVADNLKVLGYKVAAINGDMQQSQREYIVDQFRSAKSD
ILVATDVVARGIDLERISHVINYDMPNDTDTYVHRIGRTGRAGREGTSISLVPLKEMRFL
RTLERFTGSPIQEVFMPSAKDLAQSRVEHFKARIISALDKNKSLDKYKEIITEIREQLEL
DSNELLAVLALLAQGKKTFFPKEIQAKEEKPSRDNRNSRDGRKSERFERRNEQGNRARSF
ARADRKPYHTLNIDLTTYKLDVGRDNDVQPRNIVGAIANEGNIDSKHICNISIQKDYTLV
DLPSNLSPKVINHLKKVWVAGKKLNLTVQ
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgagactaaaaaagattttaatcagcttgggctgagtaaagatattgtagat
actgttattaaattaggatatgaaaatcctacaccaattcaacagtatgctattccatat
atattatcgggtagagatgtgctaggacaagcacaaacgggtacaggtaaaactgcagca
tttgcattaccattgataaataaaattgatttaaaatctaaagataaatcgccacaagtt
ttggtgttagctcctactagagagttagctattcaagttgcagagcaatttgaagcattt
gcagaaaatgtaccaaatttagatgttgcttgtatctatggtggccaagaatatggttca
caaattagagcacttaaaagaggggtaaaagtagtggtgggtactacagggcgtgtcatg
gatcatattgaaaaaggtacgctagagcttgataacctaagagcactagttttagatgaa
gctgatgaaatgcttagaatgggctttattaatgatgttagatttgtcttaagtcatatt
tctgatcagtgccaaagattacttttctcagcaacaatcccaactgatattgctaacatt
attgaagagtacctaagaaatccttgtaagatacaagtaaaggctaagacaaaaactgcc
aacacagtgacacaaaaatttatcgttatcaaaggctttagaaagatagatgctttagat
agattgcttgagacagaagaaactgatggtgttattatatttgttaaaactaaaaatagc
actatcgaagttgcggataacttaaaggtgcttggctacaaagtagccgctataaatggt
gatatgcaacaatcacagcgtgaatatattgttgatcaatttagaagtgctaaatcagat
atcctcgttgctacagatgtagtagctagaggtatagatcttgagcgtattagccatgtg
attaactatgatatgcctaatgatacagatacttatgtacatagaattgggcgtacaggt
agagcagggcgtgaaggtacatcaatttctttagtgccactcaaagaaatgagattcttg
cgtactcttgagagatttacaggctcgccaatccaagaagtatttatgccaagtgccaaa
gatttagcccaaagtagggtagaacactttaaagctagaataatctcagcattagataaa
aataaatctttagataaatataaagaaattattactgagattcgtgagcagttagagctt
gattcaaatgagcttttggctgtacttgcgctattagcgcaaggtaagaaaactttcttc
ccaaaagagattcaagctaaagaagaaaagccatcccgtgataatagaaattctagagat
ggtagaaaaagtgaaagatttgaacgtagaaatgagcaaggtaatagagctagaagtttt
gctagagcagatagaaaaccgtatcatactttaaatattgacttaactacttataagtta
gatgttggtcgtgataatgatgttcaacctagaaatatcgtcggagctatagctaatgaa
ggtaatattgatagtaagcatatctgtaatatctctattcaaaaagattatacattagtt
gatttaccatctaacctttcaccaaaagtgataaatcaccttaaaaaggtctgggttgca
ggtaaaaaattaaatcttactgtacaataa
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