Fontisphaera persica: NXS98_02400
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Entry
NXS98_02400 CDS
T09048
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
fpes
Fontisphaera persica
Pathway
fpes02020
Two-component system
fpes02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fpes00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NXS98_02400 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NXS98_02400 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpes03021
]
NXS98_02400 (rpoN)
Transcription machinery [BR:
fpes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NXS98_02400 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_Tnp_ISL3
HTH_3
LacI
HTH_IclR
HTH_23
HTH_Crp_2
HTH_31
DUF3187
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
WCJ59999
LinkDB
All DBs
Position
complement(618529..620031)
Genome browser
AA seq
500 aa
AA seq
DB search
MAQGLHLTQTLKQTLVLAPQMQQSLALLQAPILELKALVEKELQQNPVLEELPPSSNETT
DKSESDLGEAPSSRMDPTEPPADVTYDPATERESKAPVDDFQAEFERLAQLDQEWRDHFS
QTQTPLRSREEDEEKRAYMFESLTNGVSLQEDLLEQMRLSDLSPEQRPIAELIIGNIDEN
GYLKASVDELSFSTNVPKEQIEAVLKVIQTFHPPGVGARDLRECLLLQLERAGRQDSLEY
KIIQSHMEELGRRRFPEIAKALNLPVAEVQEAARRIATLDPRPGRAVSAEPDIYIVPEVF
VTKSGDDYVVTLNDEHIPRLRISNQYKDLMSQADSDNEVRDYIRNKIQAGKFLIKSIHQR
QQTILNIAKEIVKRQRDFMEKGVSALKPMTMAQVAEAVGVHETTVSRAVSGKYMQTPQGI
YEMRYFFTSGLQTTTGDGVSNATVKEMIAELFRNESPKYPLSDEEVVRLLKEKGIVIARR
TVAKYRAELGILPSNLRKVY
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaggtttgcatctgacacagacgttgaagcaaacgctggtgctggcgccgcaa
atgcaacagtcactagcgttgttgcaagcccctattcttgagcttaaagcgctggtggag
aaagaattgcagcaaaatcctgtcctcgaagaattgcccccctcctccaacgaaaccacg
gacaaatctgaaagcgacctgggggaggctccttccagccggatggaccccaccgagccg
cctgccgatgtgacttatgaccccgccacggaacgcgagagcaaggcgcccgtggacgat
tttcaggccgagtttgaacggctggcacaactggaccaggaatggcgggaccacttttcc
caaacacagaccccgcttcgcagccgggaagaagacgaggaaaagcgggcctacatgttt
gaaagccttaccaacggcgtttccttacaggaagacctgttggagcaaatgcggctttcg
gacctctcgccggagcaacgccccattgccgaattaatcatcggtaacattgacgaaaac
ggctatctgaaagcctcggtggatgagctttccttctccaccaatgtgcccaaagaacaa
attgaggcggtcttgaaagtcattcagacttttcaccctcccggcgttggcgcgcgggat
ttgcgcgagtgcctcctgctgcaactggaacgcgccgggcgccaggattccctggagtat
aaaatcattcaaagtcacatggaggagctgggccgccggcgcttcccggaaatcgccaag
gccttgaatctgccggtggcggaagtgcaggaggccgcccggcgcatcgccactctggac
ccccgcccgggccgggcagtttccgcggaaccggacatatacattgtgccggaagttttc
gtgaccaaaagcggtgatgactacgtggtcacccttaatgacgagcacatcccgcgtttg
cgcatcagcaatcagtacaaggatttgatgtcccaagcggacagtgacaacgaggtgcgc
gactatatccgcaacaaaattcaggccggcaagttcctcattaaaagcattcatcaacgg
cagcaaaccatcctcaacatcgccaaagaaatcgtcaaacggcagcgcgatttcatggaa
aaaggggtctcggccctcaaacccatgaccatggcgcaggtcgccgaggctgtgggagtg
catgaaaccaccgtcagccgggcggtctccggcaagtacatgcagacgccccagggcatc
tacgagatgcgctacttcttcaccagtgggctgcaaaccaccaccggcgacggcgtctcc
aacgccaccgtcaaggaaatgattgccgagttattccgcaacgaatcccccaaatacccc
ttgagcgatgaagaggtggtgcggttgctcaaggaaaagggcattgtcattgcccgccgt
accgtggcgaaataccgggcggaactgggcattttgccctccaatctccgcaaagtttat
tga
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