Fontisphaera persica: NXS98_15735
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Entry
NXS98_15735 CDS
T09048
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fpes
Fontisphaera persica
Pathway
fpes03030
DNA replication
fpes03430
Mismatch repair
fpes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NXS98_15735 (dinB)
03430 Mismatch repair
NXS98_15735 (dinB)
03440 Homologous recombination
NXS98_15735 (dinB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpes03032
]
NXS98_15735 (dinB)
03400 DNA repair and recombination proteins [BR:
fpes03400
]
NXS98_15735 (dinB)
Enzymes [BR:
fpes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NXS98_15735 (dinB)
DNA replication proteins [BR:
fpes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NXS98_15735 (dinB)
DNA repair and recombination proteins [BR:
fpes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NXS98_15735 (dinB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
IMS
DNA_pol3_finger
IMS_C
HHH_6
PHP
IMS_HHH_1
HHH_RS2-RL21-YNQ2
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
WCJ61269
LinkDB
All DBs
Position
complement(4206919..4211298)
Genome browser
AA seq
1459 aa
AA seq
DB search
MPAKIIHLDADAFFASVEQAADPRLRGRPVAVGGEKRGIIASASYEARRFGIYTPMPAAL
ARRLCPALILLPGDFEKYERFSQWMFSYAYDFTPDVEVASIDEGYLDVTGARRPPFEVAH
RLREAIRQSLKISVSEGVAANKLVSQVASKLNKPAALLEVPPGREAEFLCPLPNRWLPGV
GPKLGERLNAAGLARVGQIAATPPELLEVLVGSGAGTLHRFARGLDDRPVVPSRAPAKSF
GQQETFAQDLTDEEYAQAVLRRMADELFAKLRAAGQAARTLTVKVRYNDMAEDQCSESLP
EPVCVETEVYGRLRLLLKRAWRRRVSLRMVSLRLSHLYDGRITGELELLPADGQSEARRR
LAAAVDALREKFGCKVVMRGHDLLLEERKTQTDISPDNSRNLPLPPPTREGQGKRWREPA
AARRPASVPVIPLRVRSYYSFLASTLAIADIVRLAQQHELPAIGLADLGHLHGAPEFVQQ
AQAAGLQPLVGTEVLLDGRPLVLFVENARGYARLCRWLSLPPGQLSLRQLEEGTDGLLAL
GAEARLAAWFPGRFYGLVCAPEEAARFPAHLPLAWGQPVHYATPPDRWKFEVLEAIRTLT
LLRQEHPAKLPGELHWRAPAELRQQFRLPPRVLAGNAEIAERCRGFRFPFGPPQFPVFQA
PDGSPSRAFLRRLVLEGARRRYPDRWTQVRPQLEEELAIIGEVGYEDYFLVVWDLLRECR
RRGMDWLTRGSAADSLVCYCLGISNVCPLRFDLYFRRFLNRERMAMHKLPDIDVDFPHDR
KDDVIALLFEKYGPEHCAVVGGFSTYQARGAVADVGKALGLSEHQVRRFTEHFPWSRARG
LVQLLRESPDCRDLPLEEEPYRSALEMAEFLDGFPRYPKMHPCGVVLSRQPIHELTPTFR
THKGWPATHYDMDAVEALGLVKLDILAQGGLAVMRDALAEIRRKEEPQKGPLPPPPAEET
KGLAPLDGGMPDLAPWDDPAVWDLIASGQARAVHHIESPAMVGLCRQSHIREIDGLVAVV
SVIRPGAANEQKKQKFCRRYQGLEPASYPHPSLEPCLRSTFGLVVYEEHVLQICEAFAGL
PPGRADQLRRALGKEKLETIQEIGREFFAAARARGRPEAVIREVWDLVTGFAGYAFCKAH
STAYAVEAYVAAWLKRYYPAEFMAAVLTHGKGFYDPLVYVLECHRLGLPLLPPTLNEPGP
AFQVVRPRPASGVSTAPPRAIRVPITQIKGLTQATRDRLLAARQQGAFTSLRDFYARVGP
APEEMELLIRAGALDEFGLSRTRLFWEAQLLRRAFGHAEAGGGQGWLLPPPGAERLSDAP
LQEPTRRQRLEWEAELLGYPVSGHPLELFDQVAWETYCPVARLGEFVGQQVVTCGLVIEQ
RLFHQITGEPMKFLTLADWTGMVETELFASTYRSYGLATVRYPVLEVTATVEPFENGRGF
TLRIHRAGKPREKPTQRQE
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaaaatcattcacctcgacgcagatgccttctttgcctcggtggagcaggcg
gcggacccccgcctgcgcgggcgcccggtggctgtgggcggcgaaaagcgcggcatcatc
gcctccgcctcctatgaggcccggcgcttcggcatctacacccccatgcccgccgccctg
gcccggcggttgtgccccgccttgattctcctgccgggcgacttcgagaaatacgagcga
ttttcccaatggatgttttcctacgcctacgacttcaccccggacgtggaggtggcctcg
attgacgaaggatacctcgacgtcaccggcgcgcgccgcccccctttcgaggtggcccac
cgcctgcgggaggccatccgccaatcgctcaaaatctccgtcagcgaaggcgtggccgcc
aacaagctcgtcagccaggtggcctccaagttgaacaaacccgccgccctgctggaagtc
ccgcccggccgggaagccgagtttttgtgtccgctgcccaaccgctggctgccgggcgta
ggccccaagctcggcgagcggctgaacgccgccggcctggcgcgggtgggccaaatcgcc
gccactcccccggaattgctggaagtgctggtgggcagcggcgccggcacgctccaccgc
tttgcccgcggtctcgatgaccgacccgtcgtgcccagccgtgcccccgccaaatctttc
gggcaacaagagacctttgcgcaggacctcaccgacgaggaatacgcccaggcggtcctg
cgccgcatggcggatgaactcttcgccaaattgcgcgcggccggccaggcggctcgcacc
ctcacggtcaaagtgcgttacaacgacatggccgaagaccaatgcagcgaaagcctgccc
gagccggtgtgcgtggaaaccgaggtgtatggacgcctccgcctgctcctcaaacgcgcc
tggcgccgccgggtgagcctccgcatggtctcgctgcggttgagccacctctatgacggg
cgcatcaccggcgagctggaactgctgccggcagacggccaatccgaggcgcgccgccgc
ctggccgccgccgtggatgccttgcgcgaaaagttcggctgcaaggtggtcatgcgcggc
catgacctgctgctggaggaacgcaaaacgcaaacggatatttcacccgataactccagg
aacctccccctcccccctccaacgcgtgagggccagggcaagagatggcgcgagcctgcg
gccgcgcggcggccggccagcgtccccgtcatcccgctgcgcgtgcgcagttattattcg
ttccttgcttccaccctggccattgccgacatcgtccgcctggcgcaacagcatgaattg
cccgccatcgggctggccgatttgggtcatttgcacggcgcgccggagtttgtgcagcaa
gcccaggccgccggcttgcaaccgctggtgggcacggaagtcctcctcgacggccgcccc
ctggtgttattcgtggaaaacgcccggggctatgcccgtctctgccgctggctcagcctg
ccgcccggccagttgtcgctgcggcagttggaggaaggcacggacggcctgctggccctc
ggcgcagaggcgcgcctggcggcatggtttcccggtcgtttctacggcctggtctgcgcg
ccggaagaagccgcccgtttccccgcgcatttacccctcgcctggggacagccggtgcat
tacgccacgccgccagaccgctggaaatttgaagtgttggaggccatccgcaccctcacc
ctcctgcggcaggagcaccccgccaaactgcccggcgagttgcactggcgcgcgcccgcc
gagctgcgccagcaattccgcctgccaccccgcgtgctggccggcaatgccgaaattgcc
gagcgctgccggggcttccggtttccctttggcccgccgcaattcccggtgtttcaggcc
ccggacggctccccctcgcgcgcctttttgcggcggctggtgctggagggcgcgcgccgc
cgttatcctgaccgctggacgcaggtgcggccccaactcgaggaggagctggccatcatc
ggcgaggtgggctacgaggactactttctggtggtgtgggatttgctgcgcgaatgccgc
cgccgcggcatggactggctcacccgcggcagcgccgccgattccctggtctgctattgt
ctgggcatcagcaacgtgtgcccgctgcgcttcgacctctacttccgccgtttcctcaac
cgcgagcgcatggccatgcacaaactgccggacattgacgtggactttccccatgaccgc
aaggatgacgtcatcgccctgctcttcgagaaatacggcccggagcattgcgcggtggtg
ggcggcttctccacctaccaggcccgcggcgccgtggccgatgtcggcaaggcgctcggc
ctttccgagcatcaagtgcggcgcttcaccgagcatttcccctggagccgcgcccgcggc
ctcgtccaactgctgcgcgaaagccccgactgccgcgatttgccgctggaggaagaaccc
taccgctcggccctggaaatggcggaatttctggatggcttcccgcgttatcccaagatg
cacccctgcggcgtggtgctctcgcgccagcccatccacgaactcactcccaccttccgc
acccacaagggctggcccgccacgcactacgacatggacgccgtcgaggccctcggcctg
gtgaaactcgacatcctggcccaaggcggcctggcggtgatgcgcgatgcgctggcggaa
atccgcagaaaagaggagccgcaaaaaggccccctcccccctccaccagcggaggaaaca
aaggggttggcgccgctggatggtgggatgccggaccttgccccctgggatgaccccgcc
gtgtgggacctcattgccagcggccaggcccgcgccgtgcatcacatcgagtcacccgcc
atggtgggcctctgccggcagagccacatccgcgaaatagacggcctggtggccgtggtc
agcgtcatccgccccggcgcggccaacgaacaaaaaaaacaaaagttctgccgccgttac
caggggttggaaccggccagctatccccatccctcgctggagccgtgcctccggagcacc
ttcggcctggtggtgtatgaggagcacgttctgcaaatctgcgaggcctttgccggcctg
ccccccggccgcgccgaccagctccgccgtgccctgggcaaggaaaagttggagaccatc
caggaaattggccgcgaattcttcgccgccgcccgcgcccgcgggcgccccgaagccgtc
atccgcgaggtgtgggacctggtcaccggttttgccggatacgccttttgcaaggcgcat
tcgacggcttacgcggtggaggcgtacgtcgccgcgtggctcaagcggtattacccggcg
gagttcatggcggccgtgctcacccacggcaagggcttttacgaccccctcgtctatgtg
ctcgaatgccaccgcctgggcctccccctcctgccgcccaccctcaatgagcccgggccg
gctttccaggtggtgcgcccgcggccggcttccggcgtttccaccgctccccctcgcgcc
attcgtgtgcccataacacaaattaaaggcctgacccaggccacccgcgaccggctcctg
gccgcgcgccaacagggcgccttcacctccctgcgcgatttttacgcccgcgttggcccc
gcgccggaggaaatggaattgctcatccgcgccggcgccctggatgaattcggcctgagc
cgcacccgcctgttttgggaggcgcagctcctgcggcgcgcctttggccacgcggaggca
ggcggcggccagggctggctcctccccccgcccggagcggagcgcctgagcgacgccccc
cttcaggaacccacccgccgccagcgcctggaatgggaggccgaactgttgggctacccc
gtcagcggccatccgctcgaactctttgaccaggtggcctgggagacttattgcccggtg
gcgcgcctgggggagtttgtgggacagcaagtcgtcacctgcggcctcgtcatcgagcaa
cggctcttccatcaaatcaccggcgaaccgatgaaattcctgaccctggcggactggacg
ggcatggtggaaaccgaactctttgcctccacctaccgcagctacggcctggccaccgtc
cgctaccctgtgctggaagtcaccgccaccgtcgaaccctttgaaaatggccgcggcttc
accctccgcatccaccgcgccggcaaaccgcgggaaaaaccgacccaacgtcaggaataa
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