KEGG   Fontisphaera persica: NXS98_15735
Entry
NXS98_15735       CDS       T09048                                 
Symbol
dinB
Name
(GenBank) DNA polymerase IV
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
fpes  Fontisphaera persica
Pathway
fpes03030  DNA replication
fpes03430  Mismatch repair
fpes03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fpes00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NXS98_15735 (dinB)
   03430 Mismatch repair
    NXS98_15735 (dinB)
   03440 Homologous recombination
    NXS98_15735 (dinB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fpes03032]
    NXS98_15735 (dinB)
   03400 DNA repair and recombination proteins [BR:fpes03400]
    NXS98_15735 (dinB)
Enzymes [BR:fpes01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NXS98_15735 (dinB)
DNA replication proteins [BR:fpes03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NXS98_15735 (dinB)
DNA repair and recombination proteins [BR:fpes03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NXS98_15735 (dinB)
SSDB
Motif
Pfam: DNA_pol3_alpha IMS DNA_pol3_finger IMS_C HHH_6 PHP IMS_HHH_1 HHH_RS2-RL21-YNQ2 IMS_HHH
Other DBs
NCBI-ProteinID: WCJ61269
LinkDB
Position
complement(4206919..4211298)
AA seq 1459 aa
MPAKIIHLDADAFFASVEQAADPRLRGRPVAVGGEKRGIIASASYEARRFGIYTPMPAAL
ARRLCPALILLPGDFEKYERFSQWMFSYAYDFTPDVEVASIDEGYLDVTGARRPPFEVAH
RLREAIRQSLKISVSEGVAANKLVSQVASKLNKPAALLEVPPGREAEFLCPLPNRWLPGV
GPKLGERLNAAGLARVGQIAATPPELLEVLVGSGAGTLHRFARGLDDRPVVPSRAPAKSF
GQQETFAQDLTDEEYAQAVLRRMADELFAKLRAAGQAARTLTVKVRYNDMAEDQCSESLP
EPVCVETEVYGRLRLLLKRAWRRRVSLRMVSLRLSHLYDGRITGELELLPADGQSEARRR
LAAAVDALREKFGCKVVMRGHDLLLEERKTQTDISPDNSRNLPLPPPTREGQGKRWREPA
AARRPASVPVIPLRVRSYYSFLASTLAIADIVRLAQQHELPAIGLADLGHLHGAPEFVQQ
AQAAGLQPLVGTEVLLDGRPLVLFVENARGYARLCRWLSLPPGQLSLRQLEEGTDGLLAL
GAEARLAAWFPGRFYGLVCAPEEAARFPAHLPLAWGQPVHYATPPDRWKFEVLEAIRTLT
LLRQEHPAKLPGELHWRAPAELRQQFRLPPRVLAGNAEIAERCRGFRFPFGPPQFPVFQA
PDGSPSRAFLRRLVLEGARRRYPDRWTQVRPQLEEELAIIGEVGYEDYFLVVWDLLRECR
RRGMDWLTRGSAADSLVCYCLGISNVCPLRFDLYFRRFLNRERMAMHKLPDIDVDFPHDR
KDDVIALLFEKYGPEHCAVVGGFSTYQARGAVADVGKALGLSEHQVRRFTEHFPWSRARG
LVQLLRESPDCRDLPLEEEPYRSALEMAEFLDGFPRYPKMHPCGVVLSRQPIHELTPTFR
THKGWPATHYDMDAVEALGLVKLDILAQGGLAVMRDALAEIRRKEEPQKGPLPPPPAEET
KGLAPLDGGMPDLAPWDDPAVWDLIASGQARAVHHIESPAMVGLCRQSHIREIDGLVAVV
SVIRPGAANEQKKQKFCRRYQGLEPASYPHPSLEPCLRSTFGLVVYEEHVLQICEAFAGL
PPGRADQLRRALGKEKLETIQEIGREFFAAARARGRPEAVIREVWDLVTGFAGYAFCKAH
STAYAVEAYVAAWLKRYYPAEFMAAVLTHGKGFYDPLVYVLECHRLGLPLLPPTLNEPGP
AFQVVRPRPASGVSTAPPRAIRVPITQIKGLTQATRDRLLAARQQGAFTSLRDFYARVGP
APEEMELLIRAGALDEFGLSRTRLFWEAQLLRRAFGHAEAGGGQGWLLPPPGAERLSDAP
LQEPTRRQRLEWEAELLGYPVSGHPLELFDQVAWETYCPVARLGEFVGQQVVTCGLVIEQ
RLFHQITGEPMKFLTLADWTGMVETELFASTYRSYGLATVRYPVLEVTATVEPFENGRGF
TLRIHRAGKPREKPTQRQE
NT seq 4380 nt   +upstreamnt  +downstreamnt
atgcccgccaaaatcattcacctcgacgcagatgccttctttgcctcggtggagcaggcg
gcggacccccgcctgcgcgggcgcccggtggctgtgggcggcgaaaagcgcggcatcatc
gcctccgcctcctatgaggcccggcgcttcggcatctacacccccatgcccgccgccctg
gcccggcggttgtgccccgccttgattctcctgccgggcgacttcgagaaatacgagcga
ttttcccaatggatgttttcctacgcctacgacttcaccccggacgtggaggtggcctcg
attgacgaaggatacctcgacgtcaccggcgcgcgccgcccccctttcgaggtggcccac
cgcctgcgggaggccatccgccaatcgctcaaaatctccgtcagcgaaggcgtggccgcc
aacaagctcgtcagccaggtggcctccaagttgaacaaacccgccgccctgctggaagtc
ccgcccggccgggaagccgagtttttgtgtccgctgcccaaccgctggctgccgggcgta
ggccccaagctcggcgagcggctgaacgccgccggcctggcgcgggtgggccaaatcgcc
gccactcccccggaattgctggaagtgctggtgggcagcggcgccggcacgctccaccgc
tttgcccgcggtctcgatgaccgacccgtcgtgcccagccgtgcccccgccaaatctttc
gggcaacaagagacctttgcgcaggacctcaccgacgaggaatacgcccaggcggtcctg
cgccgcatggcggatgaactcttcgccaaattgcgcgcggccggccaggcggctcgcacc
ctcacggtcaaagtgcgttacaacgacatggccgaagaccaatgcagcgaaagcctgccc
gagccggtgtgcgtggaaaccgaggtgtatggacgcctccgcctgctcctcaaacgcgcc
tggcgccgccgggtgagcctccgcatggtctcgctgcggttgagccacctctatgacggg
cgcatcaccggcgagctggaactgctgccggcagacggccaatccgaggcgcgccgccgc
ctggccgccgccgtggatgccttgcgcgaaaagttcggctgcaaggtggtcatgcgcggc
catgacctgctgctggaggaacgcaaaacgcaaacggatatttcacccgataactccagg
aacctccccctcccccctccaacgcgtgagggccagggcaagagatggcgcgagcctgcg
gccgcgcggcggccggccagcgtccccgtcatcccgctgcgcgtgcgcagttattattcg
ttccttgcttccaccctggccattgccgacatcgtccgcctggcgcaacagcatgaattg
cccgccatcgggctggccgatttgggtcatttgcacggcgcgccggagtttgtgcagcaa
gcccaggccgccggcttgcaaccgctggtgggcacggaagtcctcctcgacggccgcccc
ctggtgttattcgtggaaaacgcccggggctatgcccgtctctgccgctggctcagcctg
ccgcccggccagttgtcgctgcggcagttggaggaaggcacggacggcctgctggccctc
ggcgcagaggcgcgcctggcggcatggtttcccggtcgtttctacggcctggtctgcgcg
ccggaagaagccgcccgtttccccgcgcatttacccctcgcctggggacagccggtgcat
tacgccacgccgccagaccgctggaaatttgaagtgttggaggccatccgcaccctcacc
ctcctgcggcaggagcaccccgccaaactgcccggcgagttgcactggcgcgcgcccgcc
gagctgcgccagcaattccgcctgccaccccgcgtgctggccggcaatgccgaaattgcc
gagcgctgccggggcttccggtttccctttggcccgccgcaattcccggtgtttcaggcc
ccggacggctccccctcgcgcgcctttttgcggcggctggtgctggagggcgcgcgccgc
cgttatcctgaccgctggacgcaggtgcggccccaactcgaggaggagctggccatcatc
ggcgaggtgggctacgaggactactttctggtggtgtgggatttgctgcgcgaatgccgc
cgccgcggcatggactggctcacccgcggcagcgccgccgattccctggtctgctattgt
ctgggcatcagcaacgtgtgcccgctgcgcttcgacctctacttccgccgtttcctcaac
cgcgagcgcatggccatgcacaaactgccggacattgacgtggactttccccatgaccgc
aaggatgacgtcatcgccctgctcttcgagaaatacggcccggagcattgcgcggtggtg
ggcggcttctccacctaccaggcccgcggcgccgtggccgatgtcggcaaggcgctcggc
ctttccgagcatcaagtgcggcgcttcaccgagcatttcccctggagccgcgcccgcggc
ctcgtccaactgctgcgcgaaagccccgactgccgcgatttgccgctggaggaagaaccc
taccgctcggccctggaaatggcggaatttctggatggcttcccgcgttatcccaagatg
cacccctgcggcgtggtgctctcgcgccagcccatccacgaactcactcccaccttccgc
acccacaagggctggcccgccacgcactacgacatggacgccgtcgaggccctcggcctg
gtgaaactcgacatcctggcccaaggcggcctggcggtgatgcgcgatgcgctggcggaa
atccgcagaaaagaggagccgcaaaaaggccccctcccccctccaccagcggaggaaaca
aaggggttggcgccgctggatggtgggatgccggaccttgccccctgggatgaccccgcc
gtgtgggacctcattgccagcggccaggcccgcgccgtgcatcacatcgagtcacccgcc
atggtgggcctctgccggcagagccacatccgcgaaatagacggcctggtggccgtggtc
agcgtcatccgccccggcgcggccaacgaacaaaaaaaacaaaagttctgccgccgttac
caggggttggaaccggccagctatccccatccctcgctggagccgtgcctccggagcacc
ttcggcctggtggtgtatgaggagcacgttctgcaaatctgcgaggcctttgccggcctg
ccccccggccgcgccgaccagctccgccgtgccctgggcaaggaaaagttggagaccatc
caggaaattggccgcgaattcttcgccgccgcccgcgcccgcgggcgccccgaagccgtc
atccgcgaggtgtgggacctggtcaccggttttgccggatacgccttttgcaaggcgcat
tcgacggcttacgcggtggaggcgtacgtcgccgcgtggctcaagcggtattacccggcg
gagttcatggcggccgtgctcacccacggcaagggcttttacgaccccctcgtctatgtg
ctcgaatgccaccgcctgggcctccccctcctgccgcccaccctcaatgagcccgggccg
gctttccaggtggtgcgcccgcggccggcttccggcgtttccaccgctccccctcgcgcc
attcgtgtgcccataacacaaattaaaggcctgacccaggccacccgcgaccggctcctg
gccgcgcgccaacagggcgccttcacctccctgcgcgatttttacgcccgcgttggcccc
gcgccggaggaaatggaattgctcatccgcgccggcgccctggatgaattcggcctgagc
cgcacccgcctgttttgggaggcgcagctcctgcggcgcgcctttggccacgcggaggca
ggcggcggccagggctggctcctccccccgcccggagcggagcgcctgagcgacgccccc
cttcaggaacccacccgccgccagcgcctggaatgggaggccgaactgttgggctacccc
gtcagcggccatccgctcgaactctttgaccaggtggcctgggagacttattgcccggtg
gcgcgcctgggggagtttgtgggacagcaagtcgtcacctgcggcctcgtcatcgagcaa
cggctcttccatcaaatcaccggcgaaccgatgaaattcctgaccctggcggactggacg
ggcatggtggaaaccgaactctttgcctccacctaccgcagctacggcctggccaccgtc
cgctaccctgtgctggaagtcaccgccaccgtcgaaccctttgaaaatggccgcggcttc
accctccgcatccaccgcgccggcaaaccgcgggaaaaaccgacccaacgtcaggaataa

DBGET integrated database retrieval system