Fontisphaera persica: NXS98_16370
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Entry
NXS98_16370 CDS
T09048
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
fpes
Fontisphaera persica
Brite
KEGG Orthology (KO) [BR:
fpes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpes03400
]
NXS98_16370 (addA)
Enzymes [BR:
fpes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NXS98_16370 (addA)
DNA repair and recombination proteins [BR:
fpes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NXS98_16370 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_30
AAA_11
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
WCJ59274
LinkDB
All DBs
Position
complement(4380783..4384466)
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AA seq
1227 aa
AA seq
DB search
MPSLTSQQAAAVKAQGNVLLMAGAGTGKTSTLVARCLYWLFEAQRRTSLDRVLMVTFTDA
AATEMRERIRQALWERSQQEQEREQAQLQLALLDTAHIRTLHSFNLELVRRHFLELKLDP
QASVLDPTQARLLQEEVLEALWDRHLAAASAQTGARAWLKTLGTDGERRVRDWLLDLHRR
WRILPDPKQWMEQQLGLLGSPEPQDWEQKLPAAFTSWAQEWREFLKCLNKEHYAGEAKIK
EETIKYAQEFAALVPEQLDSLQSVIECLQGIVARNTTENWPSRQATAGREPIKKFLQEAQ
QFLGYLKGDSGSPLDEDWHIVRPWLKTFLELVREFEEGYAQAKRQRGALDFNDFEQFALR
LLYEPGGDPSAIAREWRERFDVVLVDEYQDINPAQDAIIRALSREGERANRFLVGDVKQS
IYRFRGADPKIFQDYAHQWARLPHSQVLHLNENFRSHEGILVYVNHFFTGLMVRQVGGVE
YDKAAHLQFGAAAERSQFSRQNDGKDSRRVELHLILPGQPAEASNAAQPEENAQDSAAEN
EEASAPVDADELKIEARLVARKLLELKGRHRVWRRQEKQFVPADWRDMVILLRAPRGRAE
AFVQECQRAGIPLRAELQNFLESQEVQDLVNLLRLLDNPRQDLPLVAVLRSPLVGLKLDD
LARIRLASQKSCLWIALQRWLEADGAADGEDSPARRVKQFVEQYQRWRELARRGALVTCL
ETILTETHYDVWCQTQPEGAQRHANVQHLLHVARHFDNLQRQGLHRFLQYLESYAELDLR
LESPQAVAENCVRLMSIHQSKGLEFPIVVLAQLGMRFNFTQEEIMWDEELGLCPRVHPPG
RPAYPSLLRRLAQHRQRMEMMGEELRLLYVAMTRACDLLVLTGTASPAQMKRWRQQAALP
ASARAVANAQSALEWVGRWWLANLPEDDRKKPEISNGCNGLVRWQIHRAEDLATWKPPAA
DQGPPPEKEAARGQADIWVGHWKSLREWKYRAHAATLEPAKTHVSALRHRAMLEAEGPAE
AQVLPQAYPHLFGQGKWSDQKRGMQAGALHHLFLEQLDLGSEPSLEHFQAQAQLMVQQGL
LAPAEAGQLQLERLLAFWTSELGVQIRAHRAHVHREIPFTARFTAADLQAAGLATPGKLG
EEEFVVVQGVADLMVLLENELWVLDYKTDHITMEKVAERAEFYAPQVRLYGLALSRIYHR
PVVRLYLHFLVPGVTSTVVPIAQAGTE
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctgacttcccaacaagcagccgccgtcaaggcgcaaggcaatgtgctgctc
atggcgggcgccggcacgggcaaaaccagcacgctggtggcgcgctgtctgtactggttg
tttgaagcgcaacgccgcacctcgctggaccgtgtgctcatggtgaccttcaccgacgcg
gcggccaccgaaatgcgcgagcgcatccgccaggctttgtgggaacgcagccagcaggag
caagagcgggagcaggcgcaactgcaactggcgttgctggacacggcccacatccggaca
ctgcacagcttcaacctggagctggtgcggcgccatttcctggagttaaagctggatccg
caagcctcggtgctggatcccacgcaagcccggctgttgcaggaggaggtgctggaggcg
ctgtgggacaggcatctggcggcggcttcggcgcaaaccggcgcgcgggcgtggttgaaa
acgctggggacggatggcgagcgccgcgtgcgggactggcttttggatttgcatcggcgc
tggcgaatccttccagaccccaagcagtggatggagcagcaattgggtttgctggggagt
ccggagccgcaggattgggagcaaaaactgccggctgcgttcacctcctgggcgcaagag
tggcgcgaatttttgaaatgcctcaacaaagagcattatgcgggcgaagctaaaatcaag
gaggaaaccataaagtatgcgcaggaattcgctgcattggtgccggagcaactggattcc
ctgcaaagtgtcattgagtgtttgcagggcatagtagcgcgcaataccacggagaactgg
ccctccagacaagccacagccggacgagagcccataaaaaaattcttgcaggaagcccaa
caattcctggggtacctcaagggagattctggttctcccctggatgaggactggcacatt
gttcgtccctggctcaagacgttcctggagctggtgcgggagtttgaggagggttacgcc
caggccaaacgccagcggggcgcgctggactttaatgatttcgagcaatttgcgctgcgg
cttctctacgagccgggtggcgatccttcggccattgcccgggagtggcgcgagcggttt
gatgtggtgctggtggacgaataccaggacatcaaccccgcccaggacgccataattcgc
gcactatcccgggagggggagcgggccaaccggtttctggtgggcgatgtcaaacagagc
atctaccggttccggggcgccgaccccaaaatcttccaagactacgcccaccagtgggcc
cggctgccgcacagtcaggtgctgcacttgaatgaaaatttccggagccatgaaggcatt
ctggtttacgtgaatcactttttcacggggctgatggtcaggcaggtggggggggttgaa
tatgacaaggccgctcacttgcaatttggcgcggccgcggaacggagccagttcagccgc
cagaacgacggcaaggacagtcggcgagtggagctgcacctcatcctgccgggtcagccc
gcggaagccagcaacgccgcgcagccggaggaaaacgcgcaggactcggccgcggaaaat
gaagaggcgagcgcgccggtggatgcggatgaactgaaaattgaggcgcggctggtggcg
cgaaaattgttggagctcaagggccgccatcgggtctggcggcggcaggaaaaacaattt
gttccagccgactggcgggacatggtcatcctgctgcgcgcgccgcgcgggcgggcggag
gcatttgtccaggagtgccagcgggccggcatcccgctgcgggcggagttgcaaaatttc
ctggagtcccaggaagtgcaggatttggtgaatttgctgcggctgctggataacccccgg
caggacctgccgctggtggcggtgttgcgctcgccgctggtggggttaaagctggatgac
ctggcgcgcatccgtctggccagccagaagagctgtttgtggattgccctgcaacgctgg
ctggaggcagacggcgcggccgatggggaagattcgcccgcgaggcgggtcaagcaattt
gtcgagcagtaccaacgttggcgggagctggcgcgacgcggcgcgctggtcacgtgtctg
gaaaccatcttgaccgaaacgcattacgatgtgtggtgccagacgcagccggagggcgcc
caacggcatgccaacgtgcaacatctgcttcacgtagcccggcattttgacaatctccag
cgccaggggctgcatcgctttctgcaatacctggaatcctatgcggagctggatttgcgt
ttggaatcgccgcaggcggtggcggagaattgcgtgcggctgatgagcattcatcaaagc
aaaggactggagtttccgattgtcgtgctggcccaattggggatgcgattcaattttacc
caggaagaaatcatgtgggacgaggagctgggtttgtgtccgcgggtgcatccccctggc
cgcccggcctatccctcgctcctgcggcggctggcccagcatcgccagcggatggagatg
atgggggaagagctgcggttgctgtatgtggcgatgacccgcgcgtgtgacctgctggtg
ctcaccggcaccgcctcgccggcacagatgaagcgctggcggcagcaggcggccctgccg
gcgagcgccagggccgtggcaaacgctcaaagcgcgctggagtgggtgggcagatggtgg
ctggccaaccttcccgaggacgaccggaaaaaaccggagataagcaacggctgcaatgga
ttggtgcgctggcaaattcatcgagcggaagacctggccacgtggaagccgccggcggcg
gaccaagggccgcccccggaaaaggaggcggcgagagggcaagcggacatttgggtgggc
cattggaaaagtttgcgggagtggaaatacagggcacatgcggccacgctcgaacccgcc
aaaacccatgtgtcggccttgcggcatcgggcgatgctcgaagccgaggggccggcggag
gcccaggttttgccccaagcctatccgcaccttttcgggcagggcaaatggtctgaccag
aagcgcggcatgcaagcgggcgcactgcatcatttatttctcgaacaactggatttgggc
agcgagccttcacttgagcattttcaggcccaagcgcagctcatggtgcagcaagggctg
ctggcaccagcggaagcaggccagttgcaactggaaaggttattggcgttctggacttcg
gaactgggcgtgcagattcgcgcgcaccgcgcccacgttcatcgtgaaataccgttcacc
gcccggtttacggccgcggatttgcaagccgccggtctggccacgccggggaagctggga
gaggaggagtttgtggtggtgcagggcgtggccgatttgatggtgcttttggaaaatgag
ttgtgggtactggattacaaaactgaccatattacaatggaaaaggtggctgagcgcgcc
gagttttacgcgccgcaagtgcggctctacggcctggctttaagccgcatttaccaccgg
ccggtggttcgtttgtatctgcactttctggtccccggcgtgacgagcacagttgtaccc
atcgcacaagccggcacggaataa
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