Mangrovivirga cuniculi: DCC35_00475
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Entry
DCC35_00475 CDS
T05953
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
fpf
Mangrovivirga cuniculi
Pathway
fpf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DCC35_00475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpf03400
]
DCC35_00475
Enzymes [BR:
fpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCC35_00475
DNA repair and recombination proteins [BR:
fpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DCC35_00475
RecFOR pathway proteins
DCC35_00475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_3
Mg_chelatase
AAA_16
AAA_22
nSTAND3
AAA_14
Rad17
AAA_PrkA
Sigma54_activ_2
TsaE
NB-ARC
AAA_33
RNA_helicase
AAA_18
NTPase_1
NPHP3_N
Bac_DnaA
AAA_24
bpMoxR
ABC_tran
DUF815
Torsin
NACHT
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QCK13328
UniProt:
A0A4D7K1K5
LinkDB
All DBs
Position
complement(104236..105273)
Genome browser
AA seq
345 aa
AA seq
DB search
MREEYLQPDKNFLSPGDKEIEKALRPLSFEDFTGQRKVVENIKIFVEAARKREEALDHVL
LHGPPGLGKTTLSHIISNELGANIKISSGPVLDKPSDLAGLLTNLEPNDVLFIDEIHRLN
PIVEEYLYSAMEDYKIDIMLDSGPSARTVQITLNPFTLIGATTRSGLLTSPLRARFGINA
RLEYYDAEMLKTIVQRSAGILSTPIEDNAAVEIAGRSRGTPRIANNLLRRTRDFAQVKGD
GTITKGIAEMALNALEVDKNGLDLMDNRILLTIIEKFNGGPVGITTIATACGEDGETIEE
VYEPFLIQEGYIKRTARGRQATPLAYKHLNITMPGRLGSLFDSDE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagagaggaatatttacagccagataagaattttttaagccccggagataaggaaatt
gaaaaggcattgagaccattgtcttttgaggattttaccgggcaacggaaagtagttgaa
aacattaagatttttgttgaggctgcgaggaagagagaagaagcactggatcatgtttta
ctacatggccctcccggtctgggaaagacgactctttcacatattatttcaaatgaactt
ggggcgaatataaagatcagttccggtcctgtgttagataagcccagtgaccttgcagga
ttattaaccaacctggagcccaatgacgttttatttattgatgagatccataggttaaat
ccaattgtagaggagtatctgtactcagctatggaggattacaaaatagatatcatgctg
gatagtgggccatccgcccgtacagtacagatcactcttaatccatttacattaattggg
gcgactacaaggtcgggtttattaacctcaccactaagagccaggtttggtattaatgcc
aggcttgaatattacgatgctgaaatgctgaaaactatagttcagcgttctgcaggtatt
ctctctacaccgatagaagataatgcagccgtcgaaattgccggaagaagcagaggtaca
ccgagaattgctaataacctgttaagaagaacgagggattttgcacaggtgaaaggtgat
ggaacaatcaccaaaggaattgcggaaatggctcttaatgccctggaggtagataaaaat
ggccttgacctgatggacaaccggatactactgaccatcatagagaaatttaacggcggg
ccggttggtattactacaatcgcaacagcttgcggtgaagatggagagaccatagaggaa
gtatacgaaccattcctgatccaggaaggatatattaaaagaacagcaagaggaaggcaa
gcaactccacttgcatacaagcacctcaatattactatgccgggtagactaggaagttta
ttcgattcagatgagtag
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