KEGG   Mangrovivirga cuniculi: DCC35_03280
Entry
DCC35_03280       CDS       T05953                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
fpf  Mangrovivirga cuniculi
Brite
KEGG Orthology (KO) [BR:fpf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fpf03400]
    DCC35_03280
Enzymes [BR:fpf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DCC35_03280
    5.6.2.6  RNA 3'-5' helicase
     DCC35_03280
DNA repair and recombination proteins [BR:fpf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    DCC35_03280
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QCK13849
UniProt: A0A4D7JBU6
LinkDB
Position
complement(711484..713934)
AA seq 816 aa
MISPFEKAEKWFNENEWQVFNFQKEAWQAVYAGDSGIINAPTGSGKTYSAAVPIISLWSE
LSKQQNKSKGVFAIWITPIRALTVEIKQAVERLASGMGIDDFNVAIRSGDTTTAQRQAIK
RKPPQLLITTPESLHLLLSQKDNDKFFSNLRVFIADEWHELLGSKRAVLTELALSRFKSL
SKQQLSIWGISATIGNMDQALDVLLGPVFPKEKKRLIRSDIEKNIQVETILPEDVKELPW
SGHLGIKMLKKVLPIIKESRSTLIFTNTRSQAEIWYQKIISAAPELMGLIAMHHGSIDRD
LRTWVEEAIHSEKLKAVVCTSSLDLGVDFRPVETVIQIGGPKGVARFVQRAGRSGHRPGE
TARIYFVPTHSLELLEAAALRTAINKGIVEDRLPYIRSFDVLVQYLVTLAVGGGFEPKTI
FKEVSSTYSFTDLSREEWLWALAFITTGGSSLTAYDEFKKVELEDGKYIVNSRRIAMRHR
LSIGTIVGDTAMNVKYNSGKRIGTIEEWFIAGLNPGDTFWFAGRSLELIRVKYMTAYVRK
SNKKSGKVPSWQGGRLPLSSQVSRLLREKISQYPVFSEGFEETTTISPLLKIQEERSLVP
REDQLLIEYFKSKEGYHMFVYPFEGRLVHEGISGLLAYRMSLLEPISFSIAMNDYGFELL
SDKPIPIQEALDNEFLSTLRLIEDIQAGVNANEMARRKFRDIASIAGLVFKGYPGQNITG
KHMQSSTQLVFDVFKEYDPDNLLLRQAYDEVLEFQLEEYRLRKALQRIEKQEIVVKHTVK
VTPFSFPIMVDRTREKVSSEKLEDRINKMKIELEKD
NT seq 2451 nt   +upstreamnt  +downstreamnt
atgatttcaccatttgaaaaagcagaaaaatggttcaatgaaaatgaatggcaggttttt
aattttcaaaaagaagcctggcaagcggtatatgctggagactccggaataattaatgct
cccacaggatcaggcaaaacatattcagcggcagtacccatcatctctttatggtctgag
ctttcaaagcagcaaaacaaatcaaaaggtgtttttgccatttggattacaccaataagg
gccttaacagtagaaataaaacaagcggtagaaagactggcttctggtatgggaatcgat
gattttaatgttgcgatcagatccggagatactactacagctcagcgacaagctattaaa
agaaagcccccgcagttattgataactacgccggaaagccttcaccttcttctttctcaa
aaagataatgataaattcttttcaaatttacgtgtcttcatcgcagatgaatggcatgag
ctacttggttcaaagagagcagttttaaccgaactggctttatcacgatttaaaagtctt
agcaaacagcaacttagtatctggggtatttctgcaacaataggcaatatggatcaggct
ttagatgtcctgctcggcccggtgtttccaaaagaaaaaaagagactaattagatctgat
atcgagaaaaatatccaggtagaaacaatattacctgaagatgtcaaagagctaccctgg
tcagggcatctgggcattaaaatgcttaagaaagttttaccaattattaaagaaagccga
agtactctcattttcaccaatacccgatcccaggcagagatctggtaccagaaaattatt
tctgcagctcctgaattaatgggtcttatagccatgcatcacggatctatcgacagggat
ctgagaacctgggtagaagaagctattcacagtgaaaaactcaaagctgttgtttgtaca
tcaagtcttgacctcggagtagacttcagacctgtagaaactgttatccaaattggtgga
cctaaaggggtagcaagattcgttcaacgggcgggaagaagtggtcacaggcctggagaa
acagcccggatttattttgtacctactcatagtctcgaattacttgaggctgcagcactc
aggacagcaataaataagggtattgttgaagatcggctaccatacatcagatcatttgat
gtgctagttcaatacctggtgacactagccgtgggcggtgggtttgaacccaaaaccatt
tttaaagaagtcagttcaacctactcttttactgatctttccagggaagaatggctttgg
gctcttgcatttattaccacaggaggaagttctttaaccgcttatgatgaatttaagaaa
gtagagcttgaagatggaaaatacattgtaaacagcagacgaatagctatgcgccatcgg
ctttcaataggtacgatcgtcggtgacacggcaatgaatgtaaaatacaatagcggcaaa
agaataggaacaatcgaagagtggtttattgcggggttaaatcccggagacacattttgg
tttgccgggcgatcactggaacttatccgtgtaaaatatatgaccgcatatgtacgaaaa
tcaaataaaaagagcggtaaggttccgagttggcaaggaggcagattgccactatcctca
caagtttccagacttctcagggaaaaaatcagccaatatcctgtgttttcggagggtttt
gaagaaactactacaataagtccgcttcttaaaattcaggaagaaaggtcattggtaccc
agggaagatcagctactgatcgaatatttcaagagcaaagagggctatcatatgtttgtg
tatccttttgaaggtcggcttgttcatgaaggaatctcaggattacttgcttacaggatg
agtttactggaacccatatcttttagcattgcaatgaatgattatggatttgaattactt
tcagacaaacccattccaatacaagaggctctcgacaatgaatttctttcaacactcaga
cttattgaagatattcaagccggggtaaatgcaaacgaaatggctagaagaaaatttaga
gatatagccagtattgcgggcttggttttcaaaggatatcctgggcagaatatcacaggt
aaacatatgcagtcatctacacaacttgtttttgatgtattcaaagagtatgatccggac
aacttattgcttagacaggcatatgatgaagtactggagtttcagcttgaagagtatcgg
ttaagaaaagcacttcaacgaattgaaaagcaggagatcgttgtaaaacatacagtaaaa
gtaaccccattctcatttccaatcatggtcgatcgaaccagggaaaaggttagctctgaa
aaacttgaagaccgtattaataaaatgaaaatagagctggaaaaagattag

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