Mangrovivirga cuniculi: DCC35_09495
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Entry
DCC35_09495 CDS
T05953
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
fpf
Mangrovivirga cuniculi
Brite
KEGG Orthology (KO) [BR:
fpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpf03016
]
DCC35_09495
Enzymes [BR:
fpf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
DCC35_09495
Transfer RNA biogenesis [BR:
fpf03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
DCC35_09495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
ALKL1_2
Motif
Other DBs
NCBI-ProteinID:
QCK14959
UniProt:
A0A4D7JFI4
LinkDB
All DBs
Position
complement(2138081..2139562)
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AA seq
493 aa
AA seq
DB search
MSKQELISDIDILTEEQQQSEEACGVQVSEEENTGKNRKVYIESYGCQMNFSDSEIVSSI
MKREGFDTTSDFSKADVVFLNTCSIREKAEQTVRNRLSQFNKVKEERPEMMIGVLGCMAE
RLKDKLLEEEKIVDMVVGPDAYRDLPTLIKQVDDGNKAVNVFLSKEETYADISPVRLDSN
GVSAFISIMRGCDNMCSFCVVPFTRGRERSRDPHSIVAEAKELFDKGFREVTLLGQNVDS
YKWSSEENNKGRLERKARKESDVAIVNFANLIEMVAKISPDLRVRFSTSHPKDITDEVLE
TMNKYENICNYIHLPAQSGNSRVLKLMNRTYDREWYIDRVDAIRRIIGDDCGISSDMIAG
FCTETEEDHQETLTLMDYVKYDFSYMFFYSERPGTLAAKKYEDDIPLKVKKRRLQEIINK
QQEHSLERNKKAIGKVHKVLVEGTSKRSDEQLQGRNSENKVIIFPRGNQEKGQYVNVLVN
DCTPATLFGEVVD
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcaagagttaatcagtgatatcgatattttaactgaagaacagcagcagtct
gaagaagcttgtggagtacaggttagtgaagaagaaaacactggaaaaaacagaaaagtt
tatatagagagttacggttgtcaaatgaatttcagcgatagtgagatcgtttcttctatc
atgaaaagagaaggatttgatacgacttctgatttctcaaaagctgatgttgtatttttg
aatacctgttctatcagggaaaaagctgagcaaacagttagaaaccgactttctcaattt
aataaggttaaagaagagcgccctgaaatgatgatcggtgttctgggctgtatggctgaa
agacttaaagacaaacttcttgaagaagaaaaaattgtcgatatggttgtcggacctgat
gcttaccgggaccttcctacattgatcaaacaggttgatgatggcaataaagctgtaaat
gttttcttatcaaaagaagagacctatgctgacattagtcctgttagactggacagcaat
ggagtttcagccttcatcagtattatgagaggatgcgataacatgtgttctttttgcgtt
gttcctttcacaagaggccgcgaaagaagccgtgatcctcattccatagttgctgaggct
aaagaattatttgataaaggttttagagaagtaacattacttggccagaatgtagattcc
tataaatggtcatcagaggaaaataataaaggaagactggagaggaaagccagaaaggaa
agtgatgttgcaatagtaaacttcgcaaacctaatagaaatggttgcaaaaatcagcccc
gatcttagggttagatttagtacttctcacccgaaagatattacggatgaggttcttgaa
accatgaataagtacgagaatatatgcaactatattcaccttcccgctcagtctggaaat
agtcgggttttaaaattaatgaaccggacttatgatcgcgaatggtatattgaccgagtt
gatgcgataagaagaatcattggtgatgattgcggcatctcttctgatatgattgcagga
ttttgcactgaaacagaagaagaccaccaggaaacactcactttaatggattatgttaaa
tacgacttttcttatatgttcttttatagtgagagaccaggtactcttgccgctaaaaaa
tatgaagatgatattccattgaaagtaaagaaaagaagattgcaggaaatcattaataaa
cagcaagaacattctcttgaacgcaataaaaaagcaattggtaaagttcataaagtatta
gtagaaggaacatccaagagaagtgatgagcagttacaaggtcgaaattcagaaaataaa
gtaataatattccctagaggaaaccaggaaaaaggccaatacgttaatgttttggtaaat
gattgcaccccggcaacactttttggagaggtagtcgattaa
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