Mangrovivirga cuniculi: DCC35_10090
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Entry
DCC35_10090 CDS
T05953
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fpf
Mangrovivirga cuniculi
Brite
KEGG Orthology (KO) [BR:
fpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpf03032
]
DCC35_10090 (topA)
03400 DNA repair and recombination proteins [BR:
fpf03400
]
DCC35_10090 (topA)
Enzymes [BR:
fpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DCC35_10090 (topA)
DNA replication proteins [BR:
fpf03032
]
Prokaryotic type
DNA Topoisomerases
DCC35_10090 (topA)
DNA repair and recombination proteins [BR:
fpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DCC35_10090 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
QCK15071
UniProt:
A0A4D7JHH9
LinkDB
All DBs
Position
complement(2285498..2287819)
Genome browser
AA seq
773 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEGFLGKDYKVTSSYGHVRDLPKGDKAIDIKNGFKPTYEITGDK
KDVIKELKKLSKDADTIYLASDDDREGEAISWHLKEALKLEDDKTKRIVFREITKNAILN
AINHPRAIDHDLVNAQQARRILDRIVGYEISPILWKKIKRGLSAGRVQSVAVRLVVERER
EIEAFNSKDSYRVTAIFKDDNNKEIKAELNKKFSTYDEAVNFLDDCTKAQFSISKLETKP
SKKSPAPPFTTSTLQQEASRKLGFSVSQTMTLAQRLYEAGKISYMRTDSVNLSDEAVSSA
TGAIKSEYGDNYSQVRKYKSKSQGAQEAHEAIRPTSFSEQDAGKDRNEQRLYELIWKRAI
ASQMSDAQIERTIATIDISTNDSVHFTATGEVIKFDGFLKVYLESTDDDEEEEAKGILPP
LSQGQSLDAKEIVSKQTFSRPPARYSEASLVKKLEEMGIGRPSTYAPTISTVQKRGYVVK
ESRPGKERNYNLITLKNGEVKKEEKTETTGAEKNKLFPTNTAMVVNDFLVEHFPNVTNYS
FTATVEKEFDEIAHGIKQWDAMIDAFYGNFHQKVEDTEAISRQEINTSRELGTDPKTGKP
VIARLGKFGPIVQLGESDDEEKPKYASMRKDQFIENITLEEALELFKLPREIGEYEGEPV
AVNIGRYGPYILHAGKFTSLHKDDDPYEIELDRAIELIEEKRKAEANKYIKTFDEDESVQ
VLNGRYGPYIKAGRQNVKIPKDKKPEELTLEECLKLAEEAKNKPKKPRGRKKK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatttagttatagtggagtctccggcaaaagcaaaaaccattgaaggcttt
ttaggtaaagactacaaagtgacctcatcatatggtcatgtaagagatttacctaaggga
gataaggctatcgatataaaaaatggttttaaaccaacttacgagatcaccggtgataaa
aaggatgtgattaaggagctgaagaaattatcaaaagatgctgacacaatctacctggca
tcggatgatgaccgtgaaggggaagcaatatcctggcacttaaaggaggctctgaagctc
gaagatgataaaactaaaagaattgtctttagggaaataacaaaaaatgccatattaaat
gcaataaatcatcctcgagcgatagatcatgatcttgttaatgctcaacaagcaagacga
attcttgacagaattgttggttatgaaatttctccaattctatggaaaaaaattaaaaga
ggtctttccgctggaagggttcaatcagtagctgttcgattggtggttgaaagagaaaga
gaaatcgaggcttttaattccaaagattcgtatcgtgttacagccatattcaaagatgat
aataataaggagattaaagctgaactcaacaaaaaattcagtacatacgacgaggctgtt
aatttcttagacgattgtacgaaggctcaatttagtatcagtaagctggaaacaaaacca
tcaaaaaagagccctgcacctccgtttaccacatccacacttcagcaggaagcaagtaga
aagcttgggttttcggtatctcagacaatgactttggcgcaaagactatatgaagccggt
aaaatttcatatatgagaactgattcggtcaatctttctgacgaggctgtttcaagtgct
accggagccattaaaagtgaatatggagataattattctcaggtaagaaaatataaatct
aaaagccagggtgcccaggaggctcacgaagctatcagacctaccagcttctctgaacag
gatgcaggcaaggacagaaatgagcagagattatatgaactaatctggaaacgtgcaatt
gcttctcagatgtctgatgcacaaattgagagaacgatagcaactattgatattagtacc
aatgatagtgtccatttcaccgcaaccggtgaggtaattaagtttgatggatttcttaag
gtctacctggaatctacagacgatgatgaggaagaagaagcaaaaggaattttacctccg
ctttcgcaaggacaatcattagatgcaaaagaaatagtatccaaacaaactttctcaaga
cctccggcaaggtactcagaagcttcattggtcaaaaaactggaagaaatgggaattggt
agaccttctacctatgctccaacaattagtaccgtccagaaaagaggatacgttgttaaa
gaatcaagaccaggcaaagaaagaaattacaatttgatcaccttaaaaaatggagaggta
aaaaaagaagaaaaaactgagactaccggagctgagaaaaataaattatttccaacaaat
acggcaatggtagttaatgatttcctcgtagagcattttccaaatgttactaactattct
tttacagcgactgtagaaaaagagtttgacgaaatcgcccacggtataaaacaatgggat
gcgatgatcgatgctttctatggcaacttccatcaaaaggttgaggataccgaagcaatc
tctagacaagagatcaacacttcaagagaacttggaactgatcctaaaacgggcaaacca
gtaatagccaggttgggaaaattcggtcctattgtccagcttggagaaagtgatgacgaa
gaaaagcctaaatacgcaagtatgcgtaaagatcagtttattgaaaacatcacactagaa
gaagcacttgaacttttcaagttacctcgcgaaataggagaatacgaaggagaaccagtt
gctgtaaatataggaagatatggtccttacattttacatgcaggcaaattcacttcacta
cataaagatgatgatccatacgagatcgaattggacagagcgatcgaattgatagaagaa
aaaagaaaagctgaagcgaataaatacatcaaaacttttgatgaagatgagtctgtacaa
gtcttaaatggccgttatggaccttacattaaggcaggaagacaaaatgtcaaaatacct
aaagacaaaaaaccagaggaactgactctcgaagaatgtttgaaactggctgaagaagct
aagaacaaaccgaaaaaacctagaggaagaaaaaagaaatag
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