Mangrovivirga cuniculi: DCC35_12400
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Entry
DCC35_12400 CDS
T05953
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
fpf
Mangrovivirga cuniculi
Brite
KEGG Orthology (KO) [BR:
fpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpf03016
]
DCC35_12400
Enzymes [BR:
fpf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
DCC35_12400
Transfer RNA biogenesis [BR:
fpf03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
DCC35_12400
Prokaryotic type
DCC35_12400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QCK15485
UniProt:
A0A4D7JXN6
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All DBs
Position
2810251..2811168
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AA seq
305 aa
AA seq
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MAFYITILGSNASTPAYGRNQTSQYIKLHGHNFLMDCGEGTQLLLKKNRLKIQRINKIFI
SHLHGDHYFGLIGLVSTMHLLGRTTPLEIYGPKGLGEILTIQFKYSDTKLRYDLTFKELD
YGKSGVIFEDKKIQVEHFPLKHRIDCHGYIFKEKPKPIRINRDAIPENLAVEEVSILRQG
KSVYNEDGSIKYDKKEYTLPPRKSFSYAFASDTIYDPEIVNYIKDVDLLYHESTFLKDEE
ERAAQTFHCTTYQAADIAKRANVGKLLLGHYSTRYRNLAPFAEEAKEIFENSELSVEGKV
YELKD
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttggctttttatataacaatactggggtctaatgcatcgacgcctgcatacgggagaaac
cagacgtcgcagtatatcaaattgcatggtcacaacttcttaatggactgtggagaaggc
actcaattgttattaaaaaagaaccgcctcaaaattcaacgaattaataaaatatttata
agtcatttgcatggtgatcattattttggtcttataggcctggtatccaccatgcattta
ctgggccgtactactccattggaaatatatggtccaaaagggttgggtgaaattttaact
atccaattcaaatattctgacaccaaactcagatacgatcttacctttaaggaacttgat
tacggaaaaagcggggttatttttgaagataaaaagattcaggtcgagcatttcccttta
aagcacagaatcgattgtcatgggtacattttcaaagaaaagcctaagccaatcaggatc
aatcgggatgccattccggaaaacctggcagtggaagaagtttctattttaagacagggc
aagtctgtttacaatgaagatggaagtattaagtatgataaaaaagaatatacacttcca
ccgagaaagtcttttagttatgcttttgcctccgatactatttatgatcctgagattgta
aattatattaaagatgtggatctcctttatcatgagtctacctttttaaaggatgaagaa
gaacgtgctgcccagacttttcactgcactacctaccaggctgcagacattgcaaaacgt
gctaatgtaggcaagcttctcctgggtcattattcaaccagataccgtaatcttgccccc
ttcgctgaagaagcgaaagaaatattcgaaaattctgaactatctgttgaaggcaaggtt
tacgaactaaaagattag
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