Mangrovivirga cuniculi: DCC35_15545
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Entry
DCC35_15545 CDS
T05953
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fpf
Mangrovivirga cuniculi
Pathway
fpf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DCC35_15545 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpf03400
]
DCC35_15545 (priA)
Enzymes [BR:
fpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCC35_15545 (priA)
DNA repair and recombination proteins [BR:
fpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DCC35_15545 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
Cas3-like_C_2
nSTAND3
AAA_30
AAA_16
AAA_19
AAA_7
AAA_22
PIF1
Sigma54_activat
NPHP3_N
TsaE
T2SSE
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QCK16053
UniProt:
A0A4D7JMG3
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All DBs
Position
3493454..3495958
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AA seq
834 aa
AA seq
DB search
MSIDQNSHSKSFADIILPVPIGKYFTYRVPLSLENDIQPGCRVLVPFGKRRVITGLVVHL
HGSPPKKYEAKSIIDLLDELPIAEPIQFRFFEWMADYYLCSIGEVMQAAIPSGLKLSSES
QIQLHPEFNIDNHDKPISENEQIVLENLSVDKTLTYTEVSDLLGKKSIHPIIKSLIQREA
IIIFEQVKEKYKPKKEKRIRLKSPFDSNTDELEDLMNSLDSKEKQQAVLLRYLQKVPVLH
DSNANENGILKSEITKDEELSNSSLQTLIKNDVFEEYEVIISRFDLSDKEVDDEQKLSLE
QQTAFDQILKEFEDKQTVLLHGVTGSGKTAIYSELMKLALSSDRQVLFMVPEIALTTQIV
QRLKKIFGNKLGVYHSRFSDNERVEVWQGVKNKAYDIIVGVRSSIFLPFDNLGLIIVDEE
HDSSYKQHDPAPRYQGRDMAHILGRFHNAKVLLGSATPSTESYHHAKLGKYGLVSLMNRF
GESQMPDIELVDLRDAKKKKKMKGDFSLKLLEKIEETLATGDQVIIFQNRRGYAPYLQCE
TCGHIPKCEHCDISLTYHQYKKEMRCHYCGYNEPLPLECDACGSRKLKTVSYGTEKLEED
LQLFLPEARVGRMDLETTRRKNSYETIINDFDSGQINILVGTQMVTKGLDFDKVGLVGVL
DADRMMYFPDLRSYERTFQLLLQVSGRTGRREKMGKVMIQTSIPEHQILHWVQSHDYEKF
YFSEIKERHSFLYPPFSRLINITIKNPDKLNAIQTSEAIAFALKKKYGRKGILGPQEPPV
SKIRNQYLMQLIVKIDRKTTNLGKIKSDIDQTIATTLQDKNFKRSRVVIDVDPY
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
ttgagcatagatcaaaacagtcattcgaaatcttttgcggatataatattaccggtacca
ataggtaaatactttacctacagagtaccattgagccttgaaaatgatatccagccgggt
tgccgtgttcttgtaccctttggaaaaagaagagtgatcactggtcttgttgtacatctg
catgggagtcctccaaaaaagtacgaggcaaaatcaattattgatcttctggacgaacta
cccattgccgaaccgatccagttccgcttttttgaatggatggcagattattatctgtgt
tccattggagaggttatgcaggcagctatcccttccggattaaaactcagtagcgaatct
caaatccagctacatccggaatttaatatcgataatcatgataaacctatttcagaaaat
gaacaaatagttctggaaaatctttcggttgataagacactcacttatacggaagtaagc
gatttgctgggtaaaaaatcaattcacccaattattaaatcactgattcagcgtgaggcg
attattatcttcgaacaggttaaggagaaatataagccaaagaaggaaaaaagaattcga
ttaaaatcaccttttgattcaaatactgatgaactcgaagacctgatgaattctctcgat
agtaaagagaagcaacaagcagtattattgagatatcttcagaaagttcctgttttacat
gacagcaacgctaatgaaaatggaattttaaaatcagagattaccaaggatgaggaactc
agtaattcttctttacaaacgctgatcaaaaacgatgtctttgaagaatatgaagtgatt
atctccaggtttgatctttcggacaaagaagtagatgatgaacaaaaacttagcctggaa
cagcaaactgcttttgaccagatccttaaagaattcgaggacaaacaaactgttttactt
cacggagttacgggaagtggaaaaacagcaatatattccgaattaatgaagttagctctt
tcatcagacagacaggtgttgttcatggttcctgagatagcccttacaacacagatagta
cagcgtctgaaaaagatcttcggcaataaacttggtgtctatcattcccgcttttctgat
aatgaacgggtagaagtgtggcagggtgttaaaaataaagcgtacgatataatagtcggt
gtcagatcttctatcttcttaccctttgataatttaggattaattatcgtggacgaagaa
catgattcgtcatataaacaacacgaccctgctccacggtaccagggaagagatatggca
catatcctcggtcgcttccacaatgctaaggttctcttaggttcggctactccatcaaca
gaaagctaccatcatgcgaagcttggtaaatacggattagtatcactaatgaaccgcttt
ggcgaaagtcaaatgccggacattgagttagtagacttgcgtgatgccaagaaaaagaaa
aaaatgaagggtgacttcagtcttaagctattagaaaagatcgaagaaactcttgcgact
ggtgatcaggtaatcattttccagaacagaagaggatatgcaccttatcttcaatgtgaa
acctgtggacacatccccaaatgtgaacactgtgacatcagcctgacatatcatcagtat
aaaaaagaaatgaggtgccattattgtggctataatgaacccttaccactcgaatgtgat
gcctgtggttcgcgaaaattaaaaacagtgagctatggtaccgaaaaactcgaagaagat
ctccagctatttcttcctgaagcaagagtaggtagaatggatctggaaaccacccgtcga
aaaaatagttacgaaaccataattaatgacttcgatagtggacagattaacatcctcgtc
ggaacccaaatggttactaaaggtcttgatttcgataaagtaggattggtcggagttctt
gatgcagacaggatgatgtatttccctgatttacgctcatatgaaagaacctttcaatta
ttattacaagtcagcgggcgaactggaagaagagaaaaaatgggtaaggtcatgatccaa
accagtatacctgaacatcagattttgcactgggttcaaagccatgactatgaaaagttt
tatttcagtgagataaaagaaagacattcatttttatatcctcctttttccagacttata
aatattactattaaaaatcctgataaacttaatgctatccaaacttctgaagctattgct
tttgcattgaagaaaaagtacggaagaaaaggaatattaggcccccaggaacctccagtt
agcaaaataagaaatcagtatctgatgcagcttatagtcaaaattgataggaaaactacc
aatctgggtaagataaagagtgatatagaccaaacaatagcgactacccttcaagataaa
aactttaaaaggagtcgtgtagtaatagacgtagatccttactag
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