Mangrovivirga cuniculi: DCC35_16480
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Entry
DCC35_16480 CDS
T05953
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fpf
Mangrovivirga cuniculi
Pathway
fpf03420
Nucleotide excision repair
fpf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DCC35_16480
03430 Mismatch repair
DCC35_16480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpf03400
]
DCC35_16480
Enzymes [BR:
fpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCC35_16480
DNA repair and recombination proteins [BR:
fpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DCC35_16480
MMR (mismatch excision repair)
Other MMR factors
DCC35_16480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_11
BRISC_FAM175B_helical
ResIII
Kinase-PPPase
DUF1699
Motif
Other DBs
NCBI-ProteinID:
QCK17111
UniProt:
A0A4D7JNE0
LinkDB
All DBs
Position
3699766..3702060
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AA seq
764 aa
AA seq
DB search
MEYLDHLNPPQREGVLNVEGPSMIIAGAGSGKTRVLTYRIAHLIREKNVDPFSILALTFT
NKAAREMRERIENVVGPDARSLWMGTFHSVFARILRAEAHHIGYPSNFTIYDTDDSKQLI
RQLIKQFNLDDKTYKVNSVLGRISGAKNRLISWQRYKQDAAIRAEDEAAMKPKMAQIYEE
YVKRCVKSSAMDFDDLLFNTNILFKNFPDVLLKYQHRFKFVMVDEFQDTNLSQYLITKKL
AAVHQNICVVGDDAQSIYAFRGADIRNILNFEKDYPELKIIKLEQNYRSTKNIVQSANAI
IAKNKAQLKKSVWTSNEAGDQIEVIKAQSDNEEGRLVAQSIFEEKMNNQLENSDFAILYR
TNSQSRSMEEALRKMNIPYKIIGGLSFYQRKEIKDLIAYMRYTVNHDDEQSLRRIINYPK
RGIGNTTVEKIIVAAYENNLSLWEVIQNPHRFFSGRAANAIDGFTTLIKSFKKEVEQKDA
FDAATAIAKGSGILRELYSDKTVEGLSRYENVQELLNAIKDFAESEDVEDRSMDAFLQDV
ALLTSADDSSAEDKDKVTLMTIHSAKGLEFPYVYIVGMEEDLFPSQMMLNSRADLEEERR
LFYVAITRAEKKLYLSFATSRYRFGNLKMCEASRFIDELDPQYIKMSTRYGSRQPESMPG
QRPSFAGGGSNAGGYAKNLVSSINKDRTKSQQRQPAKEHTPSAGFEASDITNLKAGDKVE
HLKFGFGEVLEIDDRGPGKKAKVKFEHFGEKTLLLSFAKLRIIE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
ttggaatatctggaccacctgaaccctccgcagcgggaaggtgtcctgaatgtggaaggc
ccgagcatgatcattgcaggcgcgggctcaggaaaaacaagagtactaacctatcgaatc
gcccatctgattagggaaaagaacgttgatcctttttcgattctggcgctgacctttacc
aataaggcagcgagagaaatgcgtgagcgtatcgaaaatgtggtcgggcctgatgccaga
agcctctggatgggtactttccactcggttttcgcgagaatattacgggctgaagctcat
catatcgggtatccgagcaactttactatatacgatacagacgatagtaaacaacttatc
agacagttgatcaagcaatttaatcttgatgacaaaacatataaagttaatagtgtactc
ggtagaatttccggagcaaaaaaccggctgatctcctggcagcgctataaacaggatgca
gcgatcagggctgaagatgaagcagcgatgaagccaaaaatggctcaaatttatgaggaa
tatgtaaagcgctgtgtcaaatcttcagcaatggactttgacgacttgttattcaacacc
aatattctattcaaaaatttccctgatgtcctgttaaagtatcaacatcgattcaaattt
gtgatggtcgatgagtttcaggatactaacctgagtcagtacctgatcaccaaaaaactg
gctgcggttcaccagaacatctgtgtggtaggtgacgatgcacaaagtatctatgctttc
cgtggtgctgacatcagaaacatactaaatttcgaaaaagactatcccgagctaaagatt
atcaagctcgagcaaaattatagaagtactaaaaatattgttcaatcagccaatgcgatc
atcgcaaagaataaggctcagctaaagaaaagcgtttggacatctaatgaggccggtgac
caaatcgaggtcatcaaagctcaaagtgataatgaagaaggaaggctggtcgcccagtcc
atctttgaagaaaagatgaataaccagctcgaaaatagtgattttgcgatcctctaccga
accaactcacaatcgagatcgatggaggaagcgttgagaaaaatgaatataccatacaag
atcattggtggtctttcattctaccaacgtaaagagatcaaagacctgatcgcttacatg
cggtacacggtcaatcacgatgatgaacaatcacttcgccggataattaactatccgaaa
cgtggaatcgggaacacaacggtagaaaagatcatagttgcagcatatgaaaacaaccta
tctctctgggaggtgatacaaaatcctcatcgcttcttttccggacgggcagctaatgcg
attgatggttttaccaccctgatcaaaagttttaagaaagaagtagagcaaaaagatgcc
tttgatgctgcgacagctattgccaaaggatcgggaattttgcgtgagctttattcagat
aagactgttgaaggactgagccgatatgaaaacgttcaggaattactgaatgcgatcaaa
gactttgctgagagtgaagatgttgaagaccgttcaatggatgcattccttcaggatgtt
gccctgctgaccagcgcagatgattcatcggctgaagataaagataaggtcacactgatg
accattcactcggctaaaggactggagtttccatatgtctatattgtcggaatggaagaa
gacctattccccagccagatgatgcttaatagccgtgctgacctcgaggaagaacgaaga
cttttctacgtagcgataacacgtgcggaaaagaagttgtatcttagctttgcgacctcg
agataccggtttggaaacctgaaaatgtgtgaagcgagccgttttatcgatgagctcgat
cctcaatatattaaaatgagtacacgctatggtagccggcaaccggaatcaatgccgggt
caaaggcctagttttgccggaggcggatcaaatgcaggtggatatgcaaaaaaccttgta
tcgagtataaataaagaccggacaaaaagccagcagcgtcagcctgccaaagagcatacg
ccgagtgccggatttgaagcttcggacataacaaatctgaaagccggggataaagtcgag
caccttaaatttggttttggagaggtacttgagatcgatgacagaggtcccggaaagaag
gcaaaagttaaatttgaacattttggagaaaaaacattgctccttagctttgctaagctg
aggattattgaatag
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