Mangrovivirga cuniculi: DCC35_17825
Help
Entry
DCC35_17825 CDS
T05953
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fpf
Mangrovivirga cuniculi
Pathway
fpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DCC35_17825 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpf03019
]
DCC35_17825 (recQ)
03400 DNA repair and recombination proteins [BR:
fpf03400
]
DCC35_17825 (recQ)
Enzymes [BR:
fpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCC35_17825 (recQ)
Messenger RNA biogenesis [BR:
fpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DCC35_17825 (recQ)
DNA repair and recombination proteins [BR:
fpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DCC35_17825 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ-1-like_HTH
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
SAP_new25
Motif
Other DBs
NCBI-ProteinID:
QCK16453
UniProt:
A0A4D7JNS5
LinkDB
All DBs
Position
4023894..4026092
Genome browser
AA seq
732 aa
AA seq
DB search
MSEVSTDLLRSTLKEVFGYHHFRGNQENIINNIINGNDTFVIMPTGAGKSLCYQLPAVVL
EGTTIVISPLIALMKNQVDQLRALGLTAYFLNSSLSKSEITKVKKETLAGNTKLLYVAPE
SLTKEENIEFLKKINISLVAIDEAHCISEWGHDFRPEYRRIKTIIGDLGEMPVVALTATA
TPKVQIDIQRNLQMDNATVFKSSFNRHNLYYEVRPKQNIKKQIIQFLKPRKGQSGIIYCL
SRKKVEEIAQFLAVNGFRAAPYHAGLESSVRMANQDGFLSEDIDIIVATIAFGMGIDKPD
VRFVIHYDTPKSIEGYYQETGRAGRDGLDGHCLMFYSYNDILKLEKFNKDKSVTERENGK
VLLEEVSAYAESAVCRRKQLLHYFGESWDEAECQSTAGCDACNNPPESFEGQEHIVTALK
AVSETGERFGIGHLVDVIRGSANQYVLSYGHDKTSIYGKGKEEPKELWSSILRQALIFEF
IEKDIDNIGVLKLTGKGKDFLKSPHDIKITKPHDYSELTRETEEEMDEPSAPTRGYDENL
FSLLKDLRKKLASQKDLPPYVIFQDNSLEEMATTYPTDRDQLTKINGVGTGKVSKFGKPF
IEAIKKYVEDNDIIKPDDILIKTSGDKSKHKIHIISQIDRQIDLEEIAESRGISFEALLD
EIENIVYSGTKLNLDYYIEDYLDEDAEEELFDYFMEAENDSLEDALDEFDEDEYSEEEIR
LIRIKFLSEVAN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagttagtacagatttactgcgatccactttaaaggaagtttttggctaccac
catttcaggggaaatcaagaaaatattataaataatattattaatggcaacgatacattt
gtcattatgcccactggtgctggtaagtcactatgttatcaacttcctgctgtggttctt
gaggggacgactattgttatctcgccattgatcgctctgatgaaaaatcaggttgatcag
ctaagagcgcttgggcttactgcctattttttaaattcttcgttaagcaagagtgaaatc
actaaggttaaaaaagaaactttagccggaaacaccaaattattatacgtggctccggaa
tcattgaccaaagaagaaaatattgaattccttaaaaagatcaatatttcactcgttgct
attgatgaggcacactgtatatcagaatggggacatgatttccgtcctgaataccgtaga
attaaaacaatcattggtgatctgggagaaatgccggtcgttgctttaacagcaacagct
actcctaaggttcagatagatattcagcgtaacctgcaaatggataacgctacggtcttc
aaatcatcatttaacaggcataacctgtattatgaagtcagaccaaaacagaatattaag
aaacagatcattcagtttttaaagcccagaaagggtcagtcaggcatcatctattgcctc
agcagaaaaaaggtggaagaaatcgcccagtttcttgctgtcaatggcttcagggctgct
ccatatcatgcgggactggaaagttcagtcaggatggctaatcaggatggtttcctcagc
gaggacattgacatcatagtggcgactattgctttcggaatgggtattgataagcctgat
gtacgttttgtcattcattatgatacgcctaagtctatcgagggatattaccaggaaacc
ggacgtgccggaagagatggtctcgatgggcactgtctgatgttttacagttacaatgac
attctcaaacttgaaaaattcaataaagacaagtcagtaacagagcgtgaaaacggcaaa
gtcttattggaagaagtctcggcttatgcagaatctgccgtatgtagaaggaagcaactt
ttacattacttcggagagtcctgggatgaagcggaatgtcaaagtactgcgggttgcgat
gcttgcaataatcctcctgaatcttttgagggacaggaacatattgttactgcattaaaa
gcagtctcagaaacaggtgaaagatttggtatcggccaccttgtcgatgtgatccgtgga
tcagcaaatcaatacgttttatcctacggccatgataaaacttctatttacgggaaagga
aaagaagaaccaaaagaattatggtcttcgattctacgtcaggcactgatttttgaattc
atcgaaaaggatatcgataatatcggagttctaaagctcactggtaaaggaaaagacttt
ttaaagtcacctcatgatataaaaatcactaagcctcacgactacagtgagcttaccagg
gaaactgaagaagaaatggatgagccgtcagctccaacaaggggttatgatgaaaattta
ttttctcttttgaaagacctccgtaaaaaactcgcgtctcaaaaggatctgcctccttat
gtgatctttcaggataattcactggaggaaatggctaccacttaccctaccgacagagat
caacttacaaagatcaatggtgtcggaaccggtaaagtatccaagtttggcaaaccattc
attgaggcgataaagaaatatgtggaagacaatgatattatcaaaccagatgatattcta
ataaaaacatccggagataagtcaaaacataagattcatataatttctcagattgacaga
cagatcgatcttgaagagatcgctgaatcaagaggcatctcctttgaagccctactagat
gaaatagagaatatcgtttattcaggaaccaaattaaacctcgactattatatcgaggat
taccttgatgaggatgctgaagaagagttatttgattatttcatggaggcagaaaatgac
agcctcgaagatgccctggacgaatttgatgaagacgaatactcagaagaagaaattcga
ctgatcagaataaaattcttatcagaggtagctaactaa
DBGET
integrated database retrieval system
