Falco peregrinus (peregrine falcon): 101913095 Help Entry 101913095         CDS       T02856                                  Symbol XRN1 Name (RefSeq) 5'-3' exoribonuclease 1   KO K12618   5'-3' exoribonuclease 1 [EC:3.1.13.-] Organism fpg  Falco peregrinus (peregrine falcon) Pathway fpg03008   Ribosome biogenesis in eukaryotes fpg03018   RNA degradation Brite KEGG Orthology (KO) [BR:fpg00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     101913095 (XRN1)   09123 Folding, sorting and degradation    03018 RNA degradation     101913095 (XRN1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:fpg03019]     101913095 (XRN1)    03009 Ribosome biogenesis [BR:fpg03009]     101913095 (XRN1)    03016 Transfer RNA biogenesis [BR:fpg03016]     101913095 (XRN1)    03036 Chromosome and associated proteins [BR:fpg03036]     101913095 (XRN1) Messenger RNA biogenesis [BR:fpg03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      101913095 (XRN1)   mRNA degradation factors    5'-3' decay     5' exonucleases      101913095 (XRN1) Ribosome biogenesis [BR:fpg03009]  Eukaryotic type   Pre-60S particles    RNases     101913095 (XRN1) Transfer RNA biogenesis [BR:fpg03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     101913095 (XRN1) Chromosome and associated proteins [BR:fpg03036]  Eukaryotic type   Gene silencing    piRNA pathway     101913095 (XRN1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_M XRN_N XRN1_D2_D3 XRN1_D1 SH3_12 Dicer_dimer Motif Other DBs NCBI-GeneID:  101913095 NCBI-ProteinID:  XP_005237772 LinkDB All DBs Position Un AA seq 1739 aa AA seqDB search MNGIIHQCSHPNDDDVHFRISEDKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMN QQRGRRFRSAKEAEDKIRKALEKGETLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKI STDKSWQGVTVYLSGHETPGEGEHKIMEFIRSEKAKPHHDPNTRHCLYGLDADLIMLGLT SHEAHFALLREEVRFGGKKSQRACAPEETTFHLLHLSLMREYIDYEFSPVKDKISFEYDI ERIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYRTYMAILPELGGYINENGHLNLKR FEKYLARLSDFDREHFSEVFVDLKWFESKVGNKYLNEAAGIAAEEARKNKQKKQKGQENS ICLAVLEKNEGEVTPKTVLEDEPEDDDLFETEFRQYKRTYYMTKMGVEVVSDDFLADQAE CYVQAIQWILHYYYHGVQSWSWYYPYHYAPYLSDIRNISELKIKFELGKPFMPFEQLLAV LPAASKDLLPKCYQHLMISQDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLQA MESCNKCLKEEEKQRNTHSACLMYWYDKDAEFQYMSPWPEKFPAIERCHTRHKTIPLDAW HVEITHNKITKINKSALYFCGFPTLKHIKHKFYLRKSGVQVFQQSSHGENMMLEIIADEN SNEQIVENVASLILGKRVFVNWPHLEEARVVAVSDGETKFYLEEPHGTQRLYMGNAVPPT KVAYVGDKEQSMWLKEVQGISEHYQRRKGIIIHETSIVVYAQLLTGNRYQLRQNGEVYLE KQWSKQVLPFVYQTVVKDIKAFDSRFSNIRTLDDLFPPGSAAFMLGSPRFSCVVFLSKVQ DSRDVITEGRIRVVFNIPCEPQLDPLIQNQHKYSVKYNPAYILASRLGVSGYLVSRFTGS IFIGRGSKKNPHGDHKANVGLNLKFNKKNEEVPGYTKKVGNEWMYSSAVEQLLAEYLERV PELFNYIAKNSQEDIFYEDDIWPGEDENGAEKVQEIVAWLKAHPVSALSRSSCDLQILDA AIVEKIEEEIEKCKQRKSNKKVRVTVKPHLLYRPLEQQNGVVPDRDAEYRLFDRVVNVRE NFSVPVGLRGTIIGIKGATRETDVLFEVLFDEEFLGGLTIRCSPARGYRLPSSALINLSH GSRSEMGNQKLMAIVKPQPAVNNCNSYASDLSSVCSQKDHLGGLNHSPRSLFVPTQQLNG RQHYNLRAENQGNSNSPQKGSFLSGNQKNKAQSKQDDEFCSIWQSLQGSGKSHHIQQNMH EKGAVLPQEIKLGTGNQFYKPEFNDSSFKGQQRKQEPYKKFKEDSKVTRGESQPHNKISN KQNFAGVNKYNVKLLKRNVSPNVPAIQKAAVDGPCTGGKKDNELESLLASLKISKENEAQ TYSKEARATNEEHLSPQSFAMKGTQMLKEILKIDGSDPETKNELKSQVNDVPALPSRQDC HGAASQYRQTKKMAAYMNKHHGTGGPQNTPALETGGHPFACPQPALSTVSELSRICSLVG MSQPDFSFLKTPQTMTVCHIKLSNGLLVHGPQCHSEAEAKEKAALFALQRLSSVGVNFPA PPPPPPPVFPNYQPLGVPVPPGSIPPVFAQPPANIMPPSSHMFGPVSWGTPVPKHYYPGS YPGNVSLAGTIPVGSHHQFIPLQVTKKRAANKKNFELKEFQSSPQAAPLKNEQPVSSDHI QQDSSSAPLKPPPAAQSTVSFQDNVATPTVPHNKSTPNTSSKRKPRKLAVNFGAPKSSE NT seq 5220 nt NT seq  +upstreamnt  +downstreamnt atgaatggcattatacatcagtgttcacatccaaatgatgatgatgtacacttcagaatc tcagaagataagatttttgctgatatttttcactatttggaagtactgtttcgcattatc aaaccaaggaaggttttcttcatggcagttgatggagtggctccaagagcaaaaatgaat cagcagcgtgggagacgttttcgatcagcaaaagaggcagaggacaaaataagaaaggca ttagaaaagggagaaactctccctacagaagccagatttgactccaactgtattacacca ggaactgaattcatggctagattgcatgagcatcttaaatattttgtaaatatgaagatt tccacagacaaatcctggcaaggagtaacagtctacttatcaggccatgagactccaggg gaaggtgagcataaaattatggagtttatcagatcagagaaagcaaagccccatcacgat ccaaacacaagacactgtctctatggcttagatgctgacttgattatgctgggattaaca agtcatgaggcacactttgcgctcttaagagaagaagtcagatttggtggtaaaaaatct caaagagcatgtgcaccagaggaaacaacgtttcatttactgcacttgtcattgatgaga gaatacattgattatgaattttcaccagtaaaagataagatttcctttgaatatgatatt gaaaggataatagatgattggatcttaatgggtttccttgtaggaaatgattttattcct catctacctcatttacacattaatcatgatgcactgccgctactttatagaacatacatg gctatcttgccggaactgggaggttacattaatgaaaatgggcatctgaatttaaaacgc tttgagaaatatctcgcaagattgtcagattttgatcgtgaacacttcagtgaagtcttt gtagacctaaaatggtttgaaagtaaagtaggcaataaatacctcaacgaggcagctggt attgcagcagaggaagccagaaaaaataaacaaaagaaacaaaagggtcaggaaaattct atatgtttggctgttttagaaaaaaacgaaggtgaagtgactcccaaaactgtgttggaa gatgaaccagaagatgatgatctgtttgaaactgagtttaggcaatacaaaagaacatac tacatgactaaaatgggtgtagaagtagtttctgatgacttcttggctgatcaagctgaa tgttacgtccaggcaatacaatggattttgcattattattaccatggagttcaatcatgg agctggtattatccttatcattatgcaccttatctgtcagatattcgcaacatcagcgaa ctcaaaatcaaatttgaactgggaaaacctttcatgccatttgaacagcttcttgctgta cttccagcagctagcaaagatctgctgcctaaatgctaccagcatttgatgattagtcaa gactctcctattatagaatattatccaccggattttaaaactgacctgaatggaaaacag caagaatgggaagctgtagtattaatcccgtttattgatgagaaacgactgctgcaggcc atggaatcctgtaataagtgcctaaaagaagaggagaaacaaagaaatactcacagtgct tgcttgatgtactggtatgacaaagatgcagagttccagtacatgtcaccatggccagag aaattccccgcaatagaaagatgtcatacaagacataaaacaatacctttggatgcttgg catgtagaaataacccacaataagataactaaaatcaacaagagtgcattatatttttgt ggatttcctactttaaagcacattaaacataagttctacctgagaaaaagtggtgtacag gtgtttcagcaaagcagccatggagagaacatgatgttggaaatcatagctgatgagaac tcaaacgagcagatagtagaaaatgttgccagtttgatacttggaaagcgtgtttttgtt aactggccacaccttgaagaagccagagttgttgctgtgtcagatggagaaactaagttt tatttggaagaaccacatggcacacagaggctttacatgggaaatgcagtgcctccaact aaagtggcatatgttggagataaggagcaaagcatgtggttaaaagaagttcaaggcatt tcagagcactaccagagaagaaaaggaataattatccatgaaacatcaatagtagtgtat gctcagttactcactggtaatagatatcagctacgccaaaatggagaagtttatttggag aagcagtggtcaaaacaagttcttccttttgtttaccaaacagttgtcaaggatatcaaa gcctttgactctcgtttttcaaacatcagaactttggatgacttatttcctcctggaagt gcagcctttatgctgggatctccacgtttttcatgtgttgtgtttctctccaaggttcaa gattcacgtgatgtgatcacagaaggtagaattcgtgtagttttcaatattccttgtgaa ccccagcttgatcctttaatacagaaccagcataaatactctgtgaaatacaatcctgca tatattttggccagccgtcttggagtaagtggatatcttgtgtccagatttacagggagt atctttattggaagaggatcaaagaaaaatcctcatggagatcacaaagcaaatgtgggg ctaaacctgaagttcaataagaaaaacgaagaagttcctggctatactaagaaagttgga aatgaatggatgtattcttctgcagtagaacaactgcttgctgagtatttagaaagggtc cctgaactatttaattatatagccaagaatagccaggaagatatcttctatgaagatgac atttggcctggagaggatgagaatggagctgagaaagttcaagaaattgttgcctggtta aaagcacatcctgtgtctgctttgtctcgctcatcttgtgacttgcaaattttggatgca gccattgttgagaaaattgaagaagaaatagagaaatgcaagcagagaaagagcaacaag aaggtgcgagtgactgtgaaaccccatttgctgtacagaccattagaacaacagaatggg gttgttccagatcgagatgcagagtataggctgtttgaccgtgttgtcaatgtgagagag aacttttctgttccagttggtcttcgaggtaccattataggaattaaaggagccactaga gaaacagatgtactcttcgaagttttgtttgatgaagaattccttggaggcctaaccata aggtgctcacctgccagaggttatcgtctgccatcaagtgccttaattaacctgtcccat ggtagtcggtcagaaatgggaaatcaaaaactgatggccatagttaaacctcagccagct gtgaataactgcaattcatatgcatctgatctgtcatctgtatgctcacaaaaagatcat ctgggaggcctcaaccattctcctcgctccctttttgttcctactcaacaactgaatgga agacagcattacaatctcagggctgaaaatcagggcaactctaactcaccccagaaagga tcatttctgagtggcaatcagaaaaataaagcacagagtaagcaagatgatgaattctgc agcatatggcaatcattgcagggttctgggaagtctcaccacattcagcaaaacatgcat gagaagggtgcagttctacctcaggaaatcaaactaggaactggcaatcagttctataag ccagaattcaacgacagcagctttaaaggtcagcaaagaaaacaggagccatataaaaaa tttaaagaagattccaaagttacaagaggtgaaagtcagccacataataaaatatcaaac aaacagaattttgcaggtgtgaataagtacaatgtcaaacttttgaagcggaatgtaagt cccaatgtgcctgcaattcagaaggctgcagtggatggtccctgtacaggcggaaagaag gacaatgaacttgaaagccttctagcttctttgaaaatttccaaagaaaacgaagcacag acttattccaaggaagcaagagctacaaatgaagaacatctgtcaccacagtcatttgct atgaaaggaactcagatgcttaaagagattttgaagatagatggctctgacccggaaaca aagaatgaactgaaatcccaagttaatgatgttcctgctctccctagtagacaggattgc catggagctgcctcgcagtatagacaaacaaaaaaaatggctgcttatatgaacaagcat catggcactggaggccctcagaacaccccagcactggaaactggaggtcacccttttgct tgtccacagcctgcactgtctactgtttctgaactttctcgtatttgttctcttgttgga atgtcacaaccagatttctctttcctaaaaacaccacagaccatgacagtttgtcacata aaactatcaaatggcttgttggttcacggaccacagtgtcattctgaagctgaagcaaag gagaaagctgcactttttgctttacagcgtttgagttctgtaggagtaaacttccctgcg cctccacctccgcctccaccagtgtttccaaattaccagccactgggagttcctgtaccg cctggatctattcctccagtatttgcacaaccccctgctaatataatgcctccatcatct cacatgtttggtccagtgtcctggggaactccagtgcctaaacattactatcctgggtcc tatccaggaaatgtgtctcttgcaggaactataccagttggttctcaccaccagtttata cctctgcaggtaactaaaaaaagggctgctaacaagaaaaactttgagctcaaggagttt cagagttcccctcaagctgcaccactaaagaatgaacagccagtgtcttctgaccacatt cagcaagatagttcttcagctcctttaaaacctcctccagctgctcaatccacagtttca tttcaagacaatgtggctactccaaccgttcctcataacaaatcaacaccaaacacttcc agcaagcgaaagccaagaaagctggctgtcaattttggcgcaccaaaatcttcagaataa

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