Falco peregrinus (peregrine falcon): 101915012
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Entry
101915012 CDS
T02856
Symbol
PATL1
Name
(RefSeq) PAT1 homolog 1, processing body mRNA decay factor
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
fpg
Falco peregrinus (peregrine falcon)
Pathway
fpg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101915012 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpg03019
]
101915012 (PATL1)
Messenger RNA biogenesis [BR:
fpg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101915012 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
101915012 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
101915012
NCBI-ProteinID:
XP_013159479
LinkDB
All DBs
Position
Un
AA seq
684 aa
AA seq
DB search
MLAERLTRLVIDSELEDPAIMQAVQTRAPVQQPGGLNSSIWDSSAVLRRMRGPLLTQEMP
SVSVLDYALPQRPPQVREEDRDPSERALPRRSSSPVIGSPPVRAVPIGTPPKQAAMPNFN
QQILCPKPVHIRATMQQRYPAPYGERMSPNQLCNVPNSSLLGHPFPHSVSPVLTHLQRAQ
LLGGAQAGRMSPSQFARVSGLVGSPLPSVNPKLLQGRVGQMMSPASGFRAFFGAPPAPPP
SQPQHPPGPGSHLQGLRPQPQMFRPDTTHLHPQHRRLLHQRQQQNRNQHRSLNGSVGDRG
GHRSSHQEQIRKDPYANLMLQREKDWVSKIQMMQLQSTDPYLDDYYYQNYFQKLEKLSAA
EEVHGDGPKKERTKLITPQVAKLEHTYKPVQFEGSLGKLTVSSVNNPRKMIDAVVTSRSE
DDETKEKQVRDKRRQTLVTIEKTYSLLLDVEDYERRYLLSLEGERPALMGERKQKICDMY
DNLRGKAPGQERPSDDHFMQIMCIRKGKRLVARILPFLSPEQAADVLMATARNLPFLIKK
DAQDEVLPCLLRPFSHVLYHLPLGTVTSLVQQLTNLPQSATTPAPTNLHLTAVLQNKFGL
SLLYLVLSRGEELQSSDVNTELMQDNQWTEVMLMATRELLRIPQAALAKPVSTPSNLISL
FSRYVDQQKLNLLETKLHLVHGIR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgctggcagaacgcttgacccggctggttattgacagcgagctggaggaccctgctatc
atgcaggctgtgcagaccagggcccccgtgcagcagcctggagggctgaactccagcatc
tgggacagctcagctgtcctgcggcgcatgcgggggccgcttctcactcaggagatgcca
tcggtgtctgtgctggactatgctctgcctcagagacctccccaggttcgagaggaagac
cgggacccttccgagcgggcgctgccccggcgttcatcatcccctgtcatcgggagtccc
cctgtccgggctgtccccattggtaccccccccaagcaggctgccatgcccaacttcaac
cagcagatcctgtgtccgaagcctgtccacatccgagctaccatgcagcagcgctaccct
gctccctacggcgaaaggatgtctcccaaccagctctgcaatgtaccgaattcctccctc
ctgggccacccgttcccccacagtgtctctccagttctcacccacctgcagagagcacag
ctgctcggaggagcccaggctggccgaatgtctcccagccagtttgcccgcgtctctggc
ctggttgggagccccctcccctccgtcaatcccaagctgctccagggcagagttgggcag
atgatgtctccagccagcgggtttcgtgccttctttggggctccccccgctccacctccc
tctcagccgcagcacccgccgggccctggatcccacctgcagggcctgaggccgcagcct
cagatgttccgaccggacacgacccacctgcacccccagcaccgccggctcctgcaccag
cggcagcagcagaaccgaaaccagcaccgcagcctcaacggctcagtaggggaccgaggg
ggccaccggagcagccaccaggagcagatacgcaaagacccctacgccaacctcatgctg
cagcgggaaaaggactgggtgtccaagatccagatgatgcagctgcagagcactgacccc
tacctggatgattattactaccagaattacttccagaagctggagaagttgtcagcagca
gaggaagtccacggcgatggtcccaagaaggaacgcaccaaactcatcacacctcaggtg
gctaagctggagcacacctacaagccagtgcagtttgagggctcgctggggaagctcacg
gtttccagcgtcaacaacccccggaagatgatcgatgcggtggtgacctcccgcagcgag
gatgatgagacgaaggagaagcaggttcgagacaagaggcgccagacccttgtcacaatc
gagaagacgtatagcctcctcctggatgtggaggactatgagagacgctacctcctgagc
ctggaaggcgagcggccggccctgatgggcgagaggaagcagaagatctgtgatatgtac
gacaatctgagggggaaagcgcctgggcaggagaggccgagtgacgaccacttcatgcag
atcatgtgcatccggaaagggaagcgcctcgtggcccggatcctcccctttttgtcaccc
gagcaagcagccgacgtactcatggcgaccgccaggaacctgcccttcctcatcaagaag
gatgctcaggatgaggtgctgccctgcctgttaaggcccttctcgcacgttctctaccac
cttcccttggggacggtcaccagccttgtgcagcagctaacgaacctacctcagagcgcg
accacgccagcgcccaccaacctgcacctcactgctgtgctccaaaacaagtttggcctg
tccctgctgtacttggtcttgagccgtggggaggaactgcagagctcggacgtgaacacg
gagctaatgcaggacaaccagtggacggaggtgatgctcatggcaacccgagagctcctg
cggatccctcaggcggccttggcgaagccagtgtccaccccctcgaacctgatctccctc
ttctctcgctatgtcgaccagcagaagctgaacctgctggagacaaaattgcacttagtg
cacgggatccggtag
DBGET
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