KEGG   Falco peregrinus (peregrine falcon): 101915709
Entry
101915709         CDS       T02856                                 
Symbol
ALYREF
Name
(RefSeq) Aly/REF export factor
  KO
K12881  THO complex subunit 4
Organism
fpg  Falco peregrinus (peregrine falcon)
Pathway
fpg03013  Nucleocytoplasmic transport
fpg03015  mRNA surveillance pathway
fpg03040  Spliceosome
fpg05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:fpg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101915709 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    101915709 (ALYREF)
   03015 mRNA surveillance pathway
    101915709 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    101915709 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpg03019]
    101915709 (ALYREF)
   03041 Spliceosome [BR:fpg03041]
    101915709 (ALYREF)
Messenger RNA biogenesis [BR:fpg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101915709 (ALYREF)
    TREX complex
     101915709 (ALYREF)
Spliceosome [BR:fpg03041]
 Complex C
  Other components
   EJC/TREX
    101915709 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101915709 (ALYREF)
SSDB
Motif
Pfam: FoP_duplication RRM_1 F07F6_N
Other DBs
NCBI-GeneID: 101915709
NCBI-ProteinID: XP_013159931
LinkDB
Position
Un
AA seq 196 aa
MCSGTCPDQTGLAGPQRSGATASIARRRPCPLGAVAPAGKEPLAARAAKGLCPPGPDADI
QELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT
SQIDTQRRPAQSVNRGGMTRNRGGSGGFGGGGGNRRGTRGGNRGRGRGAGRTSKQQLSAE
ELDAQLDAYNARMDTS
NT seq 591 nt   +upstreamnt  +downstreamnt
atgtgctcggggacctgccccgaccaaaccgggctggcaggaccgcagcgctccggggcc
accgcctccatcgccaggcggaggccctgccctctcggggcggtggcgcccgcggggaaa
gagccgctcgctgcccgggccgccaaggggctctgcccgccgggaccggacgcagacatc
caggagctctttgcagagtttgggaccttgaagaaggcagctgtgcactatgataggtct
ggccgcagtctagggacagcagacgtgcatttcgaaaggaaggcagatgctctgaaagca
atgaagcagtataatggagtccccttggatgggcgtcccatgaacattcagctggtcaca
tcacagatcgacacacagaggagaccagcacagagtgtaaacagaggtggcatgaccaga
aaccgtggtggttcaggaggatttggtggtggaggaggcaacaggcgaggtactcgtggt
ggaaacagagggagaggcagaggagctggaagaacttccaaacagcagctctccgcagaa
gaactagatgcacagctggatgcttacaatgccaggatggataccagctaa

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