Falco peregrinus (peregrine falcon): 101916555
Help
Entry
101916555 CDS
T02856
Symbol
DDB1
Name
(RefSeq) damage specific DNA binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
fpg
Falco peregrinus (peregrine falcon)
Pathway
fpg03420
Nucleotide excision repair
fpg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fpg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101916555 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
101916555 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fpg04121
]
101916555 (DDB1)
03400 DNA repair and recombination proteins [BR:
fpg03400
]
101916555 (DDB1)
Ubiquitin system [BR:
fpg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
101916555 (DDB1)
DNA repair and recombination proteins [BR:
fpg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
101916555 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
101916555 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
101916555
NCBI-ProteinID:
XP_013159463
LinkDB
All DBs
Position
Un
AA seq
1084 aa
AA seq
DB search
MYGKTAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPS
ETGIIGIIDPECRMIGLRLYDGLFKVIPLDRENKELKAFNIRLEELQVIDVKFLYGCQAP
TICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQES
ITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVT
LKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNL
GPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSD
SHRETDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASV
RLVSQEPKALVSEWKEPNGKNISVASCNSNQVVVAVGRALYYLEIRPQELRQISCTEMEH
EVACLDITPLGDTNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTF
ESSHYLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRP
TVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVP
LYESPRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTA
PHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMV
YPEEAEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAE
KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSA
VEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQN
LGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSF
HTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEEL
TRIH
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcaagactgctgtcatggaactcttccgccccaagggggagagcaaggatttg
ttgttcatcctgacagccaagtataacgcctgcatccttgagtacaagcagaacggggac
agcattgatattataacccgtgcccatggcaacgtgcaggatcgcattggccgtccctca
gagactggcataattggcatcattgacccagagtgccggatgatcggcctgcggctctat
gatggccttttcaaggtcattcccctggaccgggagaacaaggagttaaaggcttttaac
atccgcctggaagagctccaagtcatcgatgtgaagtttctctatggctgtcaggctcca
accatctgctttgtctaccaggaccctcagggtcgccatgtcaagacgtacgaggtgtcc
ctgcgcgagaaggagtttaacaaaggcccttggaaacaggagaacgtagaggctgaagcc
tccatggtcatcgcagtgccagagccttttgggggtgcgatcatcattgggcaggagtct
atcacctaccacaacggagataaatacctagctatagctccacctatcatcaagcaaagt
acaattgtgtgccacaaccgtgtggatcccaacgggtcccgttacttgctgggggacatg
gaagggcgcctcttcatgctgctcctggagaaggaggaacagatggacggcactgtcacc
ttgaaggacctgcgtgtagaactgcttggggagacgtccattgcagagtgcttgacctac
ctggacaatggagttgtgtttgtcggctctcgtcttggggattcccaacttgtgaagctc
aacgtggacagcaacgagcagggctcctatgttgtggctatggagaccttcaccaacctc
gggcccatcgtcgacatgtgtgtggtagacctggaaagacaaggccaggggcagctggtc
acatgctcaggtgcatttaaagagggttcgctgcggatcatccggaacggcattgggatt
catgagcacgccagcattgacttgccagggattaaaggtttgtggcccctgaggtcagac
tctcaccgtgaaacagacaacacgttggtgctgtcctttgtgggccaaaccagagttctg
atgctaaatggagaggaagtagaagagacagagctcacagggtttgtggatgatcagcag
actttcttctgcggcaatgtggcacatcagcaattgatccagatcacctctgcctctgtg
agactggttagtcaggagcccaaagccctggtgagtgagtggaaagagcccaacgggaag
aacatcagtgtggcttcttgtaacagtaaccaggtagtggtggctgtgggacgagccctg
tactacctggagatccgaccccaggagctcaggcagatcagctgcacagaaatggagcat
gaagttgcctgcctggacatcacccctttgggggacactaatggcatgtccccactgtgt
gcgatcgggctttggactgacatctctgcccgcatcctaaagctgccttcgtttgaactg
ctgcacaaggagatgctgggaggagaaattatccctcgctccatcctgatgacgaccttt
gagagcagccattaccttctgtgtgccctaggggatggagctctcttctactttgggctc
agccttgagacaggcttgctgagtgaccggaagaaggtgacccttgggacccagcccacc
gtcctgaggacgttccgctctctgtccaccaccaacgtgtttgcctgctctgaccgcccc
accgtcatctacagcagtaaccacaagctggtcttctccaatgtcaacctgaaggaggtg
aactacatgtgtcctctcaactcagatgggtatcccgacagtttggccttggccaacaac
agcaccctgacaattggcaccattgacgagatccagaagctgcacatccgcacggttccc
ctctatgaatcacccaggaagatctgctaccaagaggtatcgcagtgtttcggcgtgctc
tcgagtcgtatcgaggtgcaggatgccagtgggggcaccactgcactcagacccagcgcc
agcacgcaggccctgtccagcagtgtgagcaccagcaagctgttctccagcagcacagcg
ccgcatgagacatcctttggagaggaggtggaggtgcacaacctgctcatcatagatcag
cacaccttcgaagtgcttcatgctcaccagtttctgcaaaacgagtacgctctcagcctg
gtctcctgcaagctcggcaaggacccaaacacctacttcattgtgggcaccgccatggtg
tatcctgaggaggcagagcccaaacaaggccgcatcgttgtcttccactactcggatggg
aagctgcagagcctggctgagaaggaggtcaagggggctgtgtattccatggtggagttc
aatgggaagctgttagccagcatcaacagcacggtgcgcctgtacgagtggacagctgag
aaggagctgcgcacggagtgcaaccattacaacaacatcatggcactctacctgaagact
aagggggacttcatccttgtgggagatctgatgcggtctgtcctcctcctggcatacaag
cccatggaaggaaacttcgaggagattgcccgggacttcaatccaaactggatgagtgcc
gtggagatcctggacgatgacaacttcttgggagcagagaatgctttcaatttgtttgtg
tgccagaaggacagcgcggccacgaccgatgaggagcgccagcacttgcaggaggtgggg
ctgtcccacctgggagagtttgtcaatgtcttctgtcacgggtctctggtcatgcagaac
ctgggggagacatctacaccaacacagggctctgttctcttcggcacagtcaacggcatg
attggactggtgacctcactgtcagagagctggtacaacctcctgctggacatgcagaac
aggctgaataaagtcatcaagagcgtgggcaagattgagcactccttctggaggtcgttt
cacactgaacgcaaaacagaaccggctacggggttcattgatggtgacctgattgaaagc
ttcctggacatcagcaggcccaagatgcaggaggtggtggcaaacttgcagattgacgac
ggtagcggcatgaagagggaagccactgtagacgacctgataaagattgtggaggagctg
acccggatccattag
DBGET
integrated database retrieval system
