Falco peregrinus (peregrine falcon): 101917475
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Entry
101917475 CDS
T02856
Symbol
PABPC4
Name
(RefSeq) poly(A) binding protein cytoplasmic 4
KO
K13126
polyadenylate-binding protein
Organism
fpg
Falco peregrinus (peregrine falcon)
Pathway
fpg03015
mRNA surveillance pathway
fpg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101917475 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
101917475 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpg03019
]
101917475 (PABPC4)
03041 Spliceosome [BR:
fpg03041
]
101917475 (PABPC4)
Messenger RNA biogenesis [BR:
fpg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101917475 (PABPC4)
mRNA cycle factors
Stress granule specific factors
101917475 (PABPC4)
Spliceosome [BR:
fpg03041
]
Complex C
Other components
Complex C specific factors
101917475 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
NOP5NT
Motif
Other DBs
NCBI-GeneID:
101917475
NCBI-ProteinID:
XP_005239827
LinkDB
All DBs
Position
Un
AA seq
630 aa
AA seq
DB search
MNTAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEK
HEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERLSRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPAAGGYFMPAVPQAQSRP
AYYAPNQMTQMRPNPRWQQGGRPQGFQGMPNAMRQSGPRPALRHLAPAGNAPASRGLPAA
AQRVGVGTAAQNLAPRPPVAAPAPRAVPPYKYASSVRSPHPAVQPLQAPQPAVHVQGQEP
LTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLR
SKVEEAVAVLQAHQAKKEAAQKVGVVTATS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggctgccagcagttaccccatggcatcgctgtacgtgggtgacctgcacccc
gatgtcaccgaggccatgctctacgagaagttcagccccgctgggcctgttctctccatt
cgggtctgcagggatatgatcacccgccggtccctcgggtatgcctatgtcaactttcag
cagccagcagatgctgagcgtgctctagataccatgaattttgatgtgatcaaaggaaaa
ccaattcgcatcatgtggtctcagagggacccctccttgaggaagtcaggggttgggaat
gtcttcattaagaacctggacaaatccattgataacaaggcactttatgacacgttctca
gcgtttgggaatattttgtcctgcaaggtggtgtgtgatgagaatggctctaagggctac
gcatttgtgcactttgagacccaggatgctgcagatagagccatcgagaagatgaacggc
atgctgctaaacgaccgcaaagtatttgttgggagattcaagtctcgtaaagagcgggag
gctgagttgggagccaaggcgaaggaattcaccaatgtttatattaaaaactttggggat
gacatggatgatgaaagactaaaggagcttttcagcaaatatggtaaaactctgagtgtt
aaagtgatgacagaccccagcggaaaatccaagggctttggctttgtaagctttgaaaag
catgaagatgctaacaaggcagtagaagaaatgaatggaaaggatatcaatgggaaaatg
gtattcgtaggccgagcacagaagaaggttgagcgccaggcagagctgaaacggaagttt
gaacagctaaaacaagagagactcagccggtaccagggtgttaacctatacattaaaaac
ctagatgacaccatagatgatgaaaaactgaggaaggagttctcaccttttgggtcaata
acaagtgccaaggtgatgctggaagatggacggagcaaagggtttggctttgtctgcttt
tcctctccagaggaagctacgaaagctgtgactgagatgaatgggcgaattgtgggctca
aagccattgtacgttgcacttgcacaaaggaaagaagagcgaaaggcccatctaactaat
cagtacatgcagcgcattgctgggatgagagccttgcctgctaacacaatcattaatcag
ttccagcctgctgctgggggatatttcatgcctgctgtgccccaggctcagagcagaccc
gcttactatgcacccaatcaaatgacgcagatgagacccaacccacgctggcagcaagga
ggaagacctcaaggcttccagggaatgccaaatgccatgcgccagtctggaccacggcca
gcactgcgccatctggcccctgccggcaatgctccggcctctcgtggcctccctgccgct
gcccagcgagttggcgttggcactgcagcacagaatttagctcctcgtccgcctgtagct
gcccctgctcccagagcggttcctccttataaatatgcctcaagtgtccgcagcccgcac
ccagctgtacagcctttgcaggcacctcagcctgcagtacacgtgcagggacaggagccg
ctaacggcctccatgctggctgctgcccctccccaggagcagaaacagatgctgggagaa
cgtttgttccctctgatccaagctatgcaccccagccttgcagggaagatcacggggatg
ctgctagagattgacaactcggagctgctgcacatgttagagtctccggagtccctccgg
tcaaaggtggaggaggctgttgcagtgttgcaggctcaccaagccaagaaagaagctgcc
cagaaggtgggcgtggtcactgctacctcttaa
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