Falco peregrinus (peregrine falcon): 101917897
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Entry
101917897 CDS
T02856
Name
(RefSeq) collagen alpha-1(XXVII) chain-like
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
fpg
Falco peregrinus (peregrine falcon)
Pathway
fpg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fpg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101917897
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
fpg00536
]
101917897
Glycosaminoglycan binding proteins [BR:
fpg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101917897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
GH131_N
Motif
Other DBs
NCBI-GeneID:
101917897
NCBI-ProteinID:
XP_013149744
LinkDB
All DBs
Position
Un
AA seq
1760 aa
AA seq
DB search
MTEKQPLLIKLLKIISRRXGNLVFKLSTDSFKGFCFLWAVLCFTWFLGFTQGNCEGVDVL
QRLGLSGKRPSSGWSSSRTVPQGVIPFKSGVIFTQRARVEAPVSTILPAGSSTDLLVVLS
LCSHRINNAFLFAVKSKKKKLQLGVQFVPGKIIVYVGHKRSVYFDYNVHDGQWHNMAINI
RGQTVTLFTSCGKRRVHADLHFKKDEALDPHGSFLFGKINQHSVQFEGAICQFDIYPSAK
AAHHYCKYLKKQCRQADTYRPNLPPLIPLLPRDPSTSLSTPRHVEPSLQGLKNLTTAAPS
LEFGRVTAPLKTRGSGATTITLASSPPSLLRLTTKATKVTVASSSVPSSTETQPPTHSLP
RGTVTTPRVSRPTPSMRMEKPPLPTAKKAPPTSQSPATASRKESKQETKKKINQKLTLEP
SEAPITVKPMKRMTDNTTSNVHFVTLKQTPQNPSNGPVPKKHVPSPARKVDPSSVPLVYS
KPALGSARPTSRARALAFNLTTPAATDGYQIFDPLGPTPFPFLLGYPGVKGERGPQGPPG
LPGLPGPPGKRGSRGPPGPHGNPGSPGPPGLKGQKGDPGLSPGKARNGQKGDVGLPGLTG
FPGPPGRKGYKGYPGPPGHPGHQGERGPDGSPGAKGYPGRQGLPGPIGEAGPKGSRGYIG
LPGLFGLPGGDGERGIPGVPGKRGKMGRPGFPGDFGERGPPGIDGNPGELGAPGPPGVLG
LIGDMGSVGPIGYPGPKGLKGLMGNPGEHGLKGDKGDQGGAGVPGDIGFQGDKGSQGLPG
VPGARGKAGPLGKVGDKGPVGFPGPPGPEGFPGDIGPPGENGPEGLKGKPGARGLPGPRG
LPGQEGDEGPLGPPGVPGPEGRSGQKGFPGRSGPNGPKGEPGNRGRPGKVGEQGLMGFIG
PVGEPGIVGEKGDRGSVGPPGPPGVKGSMGHPGTPGGAGFPGIPGPTGPAGVRGAPGIRG
AKGRRGARGPDGPVGEPGSRGAKGRPGEPGKLGPEGLQGKMGETGETGARGFPGIQGPSG
PPGAKGAPGDPGPQGPQGPPGPLGEIGHKGPPGSMGQPGLAGEPGMKGDPGQLGVPGEQG
LIGQRGESGLEGDGGPPGPDGIKGDKGEQGLEGEKGEKGNEGLKGKEGPPGYPGITGVRG
PEGKPGKQGEKGKPGQKGSKGYQGQLGETGSPGKEGPKGNQGPKGSRGTLGPMGAPGRMG
AQGEPGLKGYQGHAGPPGPIGPPGPKGEKGEQGDDGKVEGPQGPPGDRGPVGDRGDRGEP
GDPGYPGQEGLDGERGKPGQQGLPGDPGPPGQPGAKGSKGDVGQKGKQGARGNAGSRGSP
GILGLPGPRGVVGRQGQEGAPGVDGVPGKDGVPGMLGEQGDDGEEGVTGMPGKRGNPGIP
GLPGAQGPPGFKGERGLPGQSGQTGKRGSSGGTGLPGSPGEPGPKGQPGDFGEAGFPGIV
GMFGPKGPPGDLGFKGIQGPRGPPGLMGKEGIIGPLGIQGPKGSPGPKGDKGSRGEVGLQ
GPRGPPGPRGHPGPPGPPGIPASFQQDGFGAAFQTLIDSNTALKTEGYQHPDLLMLDHGG
EIFKTLHYLSNLIQSIKRPLGTKENPARICRDLMNCEQKMNDGTYWIDPNLGCSSDTIQV
ICNFTNGGQTCLSPITVSKLDFDIGRVQMNFLRLLSSEVVQHITIHCLNTSVWREGSSEK
PSEKAVRFRAWNGQMFEAGGQLRPEVAADDCKIKDGRWHQTLFSFRTQDPQQLPIVNIYN
LPPSEPGMQYHLEVGPVCFL
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaagcagcccttgttgatcaagctgttaaaaatcatctctagaagatgaggg
aatttagtcttcaaactttccactgacagttttaagggattctgctttctctgggctgta
ttatgttttacctggttcctgggattcacacaaggaaattgtgaaggtgtggatgttctt
caaagactgggcctgtcagggaaaaggccatcgagcggatggtcctcatcacgtacagtt
cctcaaggagtcattcctttcaaatcaggggtcatcttcactcagcgggcacgtgtcgaa
gcaccagtcagcaccatcctccccgcaggctccagcactgacctgctcgtagtgctgagc
ctctgctcccaccgcatcaacaatgcttttctctttgctgtcaagagcaaaaagaaaaaa
ctgcagctgggggtccagtttgtgcctgggaagatcatagtatatgtgggccacaagcgc
tctgtatattttgattacaatgtccatgatggccagtggcacaatatggccatcaacatc
cgtggccagacagtcactttatttacttcttgtgggaagcgcagagtacatgcggatttg
cattttaaaaaggacgaggctttggatccacatggatctttcctctttgggaagatcaac
cagcactccgtgcagtttgaaggagccatctgccagttcgatatttatccttccgccaag
gcagctcatcattactgtaaatacctgaaaaaacagtgcaggcaagcagatacctaccgg
ccgaacctgccccccctcatcccgctcctgcccagggatcccagcacctccctgagtacc
ccacggcatgtggagccctcgctgcagggtctgaagaacctgaccactgctgccccatcc
ttggagtttggcagggtcactgcacccctcaagactcggggttcaggtgcaacaaccatc
acattggcatcatccccgccatcactgctcagactgacaaccaaagccacaaaggtcacg
gtggcctcatcttctgttccatcaagtactgaaacacagccacccacccattctctccct
cgggggacagtgaccacccccagggtgtctcggcccactcccagcatgcgcatggagaaa
cccccccttcccactgccaaaaaggccccaccgacaagccagagccctgccacagccagc
aggaaggagtccaagcaagagaccaaaaagaagatcaaccaaaaactgaccctggagccc
tccgaagcacccattactgtaaagccaatgaagaggatgactgataacacaaccagcaat
gtccactttgtcaccctgaagcagactccgcagaacccaagcaacgggcctgttccaaag
aagcacgtgccatcacctgccaggaaggtggatcctagcagtgtccctctggtgtacagc
aaaccagccctggggtctgcccgtcccacctccagagccagggcactggccttcaacctc
acaaccccagctgcgactgatggctatcaaatcttcgatcccctcgggcccactccgttt
ccatttttactgggatatccaggagtgaaaggagagagaggacctcagggtccaccaggt
ctgccgggcttaccaggaccacctggcaagagaggttcccgaggtcccccaggtccccac
ggaaaccctggctcacctggccccccaggcctgaaaggccagaaaggtgatcctgggctg
tcacctggaaaagctcgcaatggacagaagggagatgtgggcttacctggtttgactggg
ttccctggaccacctggtagaaagggatataaaggctaccctggaccaccaggccaccct
ggacaccagggcgaacgaggaccagatggaagcccaggtgccaaaggttatcctggcagg
cagggtttacctggccccataggggaagctggcccaaagggcagtcggggatatattggt
ctcccaggattatttgggctaccagggggtgatggagaacgagggatccctggagttcct
gggaagaggggcaagatgggtaggccgggttttcctggtgattttggggaacgaggacct
ccaggcatcgatgggaacccgggagaattgggagccccaggtcctcctggagtccttgga
ctcattggtgacatgggctctgttggaccgataggctatccaggaccaaaaggcttaaag
gggctgatgggaaaccctggagaacatggactgaaaggtgataagggtgatcagggagga
gcaggtgttccaggagatatcggcttccaaggagacaagggcagccagggtttgcctggg
gtccctggggcacgagggaaagcaggccccctgggaaaagtcggtgacaaaggtccagtt
gggtttccaggaccacctggccctgagggcttcccgggtgacattggccccccaggagaa
aacggtcccgaaggcctgaagggaaagccaggagcacgaggtttacctgggccgagagga
ctgcctggacaagagggagatgaaggacccttaggaccaccaggagtccctggtccagag
ggtcgatctggccagaagggatttccgggaagatctggtcccaatggtccaaagggtgag
ccaggaaaccgtggccgaccagggaaagttggtgagcagggtctaatgggtttcattggt
cccgtaggggagcctggaatagtgggagaaaagggtgaccgtggctcagtgggaccccca
gggcctccaggagtcaaggggtcgatggggcaccccgggacaccaggaggagcaggtttt
cctgggatccctggaccaacaggtccggcaggagtccgtggtgcaccagggataagaggg
gcgaaaggccgcaggggtgccagagggcctgatggaccagtaggcgagccagggtcacga
ggtgccaagggccgcccaggggagccaggcaagctggggcccgaggggctgcaggggaag
atgggtgagactggggagacaggagcacgtggcttcccaggtatccaaggaccttctgga
cctccaggagcaaaaggggctccaggcgacccgggtccacaaggaccacaggggccacct
ggacctttgggagaaattgggcataagggaccgcctggctcaatgggacaacctggcctt
gcaggtgaacctggcatgaagggtgatcctggccagctgggagtccctggagagcaaggc
cttattggacaaagaggagaatcagggctggaaggggacggcgggccacccgggccagac
ggcatcaagggagacaagggggagcaaggcctggaaggagagaaaggagaaaaaggcaac
gaaggactgaagggaaaagaagggcctcctggatatcccggcatcacaggtgtccgagga
ccagaagggaaaccaggaaaacagggggaaaagggcaagcctggccagaagggcagcaag
ggctaccaggggcagctcggcgagacaggatctccagggaaggaggggccaaagggaaac
caaggccccaaaggatcccgaggtaccctgggacctatgggtgctccaggaaggatgggt
gctcaaggcgagcctggcttaaagggttaccaggggcatgcaggaccaccagggccaatt
ggaccaccagggccgaagggggaaaagggagaacaaggcgatgacgggaaggtagaagga
ccacagggaccacctggagacagaggccctgttggtgacagaggtgatcgaggggagcct
ggagaccctggttatcctggtcaagaagggcttgatggagaaagaggaaaacctggacag
caaggcttacctggggatcctggaccaccaggccagccaggagcaaagggatccaaaggt
gatgtgggtcaaaaaggaaagcaaggagcacggggcaatgcagggagcagaggctcaccg
ggcatccttgggctaccaggtcctcgaggagtggtgggaaggcagggtcaagagggtgcc
cctggagtggatggagtgccggggaaggatggcgtgcctgggatgctgggagagcagggt
gatgatggggaagaaggtgtgacagggatgccaggcaaaagagggaaccctggcatacca
ggactccctggggcacagggaccaccaggattcaagggtgaaagaggattgcctggacag
agtggccaaacagggaagcgaggatcatcgggaggaacgggccttccagggagccctggc
gagccgggacccaaaggacagccgggagactttggcgaggcaggatttccagggattgtg
ggcatgtttgggccaaagggccccccaggggaccttggtttcaaaggcattcagggacca
cgtgggccgcctggtctcatgggaaaagaaggaattattggtccacttggcattcagggt
cccaagggaagtccagggcccaagggagacaagggcagccgtggagaagtgggtctacaa
ggtccaaggggtcctccaggcccacgaggacaccctggccctccgggaccgccaggaatt
ccagcctcatttcaacaagatggctttggggcagctttccagacactgatcgactcaaac
accgcactcaagacagagggttaccaacatccagaccttctcatgctggaccacggaggg
gagatctttaagactctacactacctcagcaacctcattcagagcatcaaaagacccctg
ggaaccaaggagaaccctgcacgcatctgtcgagacctcatgaactgtgaacagaagatg
aacgatggtacctactggattgacccaaatcttggctgttcctcggacaccatacaggtc
atctgcaacttcaccaacggcgggcagacgtgtcttagccccatcaccgtctccaagctg
gattttgacatcggcagagtccagatgaactttctccgcctcctgagctcagaggtggtg
cagcacatcaccattcactgcttgaatacctccgtctggcgggaaggttcctccgagaaa
ccttcggaaaaagccgtgcgtttcagggcctggaacggacagatgtttgaggcaggcggg
cagctcaggccagaagtggcagcggatgattgcaagatcaaggatggacgctggcatcag
actctcttttcgtttcggacacaggaccctcagcagctgccaattgtcaacatctacaac
cttcccccatccgagccaggaatgcaataccacctcgaggtcggccccgtgtgcttcctt
tga
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integrated database retrieval system
