Falco peregrinus (peregrine falcon): 101919304
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Entry
101919304 CDS
T02856
Symbol
DHX38
Name
(RefSeq) DEAH-box helicase 38
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
fpg
Falco peregrinus (peregrine falcon)
Pathway
fpg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101919304 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fpg03041
]
101919304 (DHX38)
Enzymes [BR:
fpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101919304 (DHX38)
Spliceosome [BR:
fpg03041
]
Complex C
Other components
Step II factors
101919304 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
T2SSE
Flavi_DEAD
PhoH
Microtub_bd
SRP54
AAA_16
SLFN-g3_helicase
AAA_30
AAA_7
Motif
Other DBs
NCBI-GeneID:
101919304
NCBI-ProteinID:
XP_005235538
LinkDB
All DBs
Position
Un
AA seq
1178 aa
AA seq
DB search
REREEEAAGGKRSRVSSYRDWEEGRDEAGSAEEDDEEETDRSSRSTRKDRHYRSVHVETP
SYTGGVSEEFWERSRQRERERREHGVFASSKEEKERKKERSRDRDHDRKREREEWDRSRH
SSRSERDSSSERSSRRSEPESPRHRPKDAATPSRSSWEEDDSGYSSARRSQWESPSPTPS
CRDSERSHRASSMRDTDRRDRDRSVRSRYLDKTPLPTPSYKYNEWADDRRHLGATPRLSR
GRGRRADGEEGIAFETEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSTEEYVKKRE
QHLHKQRQKRISAQRRQINEDNERWETNRMLTSGVVHRIEVDEDFEEDNSAKVHLLVHNL
VPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWELAG
TKLGDIMGIKKEEEKDEMVTEDGKVDYRTEQKFAEHMKEKSEASSEFAKKKSILEQRQYL
PIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMS
VAKRVSEEMGVHLGEEVGYAIRFEDCTSENTVIKYMTDGILLRESLREADLDNYSAIIMD
EAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFPVD
ILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPA
LAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFN
PRIGMDALQIYPISQANANQRAGRAGRTGPGHCFRLYTQSAYKNELLTTTVPEIQRTNLA
NVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLD
PALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYL
NVYLQWKNNSYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQXXXXXXXXXXXGTDWDVV
RKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEY
MQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEEVSAMEEEMALAEEQLRARREE
QERRNPLGSSRSTKIYTPGRKEQGEPLTPRRTPARFGL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
cgggagcgtgaggaggaggcggccggtgggaagcggtccagggtctcctcctacagggac
tgggaagagggccgtgacgaggcgggcagtgccgaggaagatgatgaggaggagaccgat
cggagcagccggagcacccgcaaggacaggcattaccgttctgtccatgtggaaacacct
tcctatacagggggtgtcagcgaggagttttgggaacgcagccggcagcgggaaagggag
cgtcgggaacacggtgtctttgcctcctccaaggaggagaaagaacgaaagaaggaacgc
agtagggatcgggaccacgatcgtaaacgggaacgcgaggagtgggacagaagtcgtcac
agcagcagatcagagagagatagctcatcagagcggagcagcaggaggagtgaaccagag
agtcccagacatcggcccaaagatgcagccacgccatctcgctccagctgggaggaagat
gattctggctacagcagtgcacgccggtcacagtgggaatctccctcacccacaccttcc
tgtcgagactcagagcgcagccaccgggcatcatcaatgcgggacacagaccggagagac
cgggacaggtctgtgaggagcaggtacttggataagacaccattgcccaccccatcgtac
aaatacaatgagtgggctgatgaccggagacatctgggggccacgccacggctgtccaga
gggagagggcggcgtgcagatggggaagagggcattgcctttgagacggaggaggagcgg
cagcagtgggaggacgaccagcggcaagctgaccgggactggtacatgatggatgagggc
tacgatgaatttcacaaccccttggcctactccactgaggagtacgtgaagaagcgggag
cagcacttgcataagcagaggcagaagcgtatctcggcacagcggcggcagattaatgag
gataatgagcgctgggagacaaatcgcatgctgaccagtggtgtggttcatcggattgaa
gtggacgaagattttgaggaggataactctgctaaagtgcatttgttggtgcacaacctg
gtgccccctttcctagatggaaggattgtcttcaccaagcagccagagccagtcatccct
gtcaaggatgccacctcagatttggccatcattgctcggaaaggcagccaactggtgcgc
aagcacagggagcaaaaggagcgtaagcgggctcagcataagcattgggagctggcaggc
acaaaactgggagacattatggggatcaagaaagaagaggagaaagacgagatggtgaca
gaggatggcaaagtcgattacaggactgagcagaagtttgctgaacacatgaaagaaaaa
agtgaagccagcagcgagtttgccaagaagaaatcaatcctggagcagagacagtatctg
cccatctttgctgtgcagcaggagttgctttccatcctcagagacaacagcattgtgatt
gtggtgggggagacagggagtgggaagacaactcagctgacacagtacctccatgaggat
ggctatacagactatggcatgattggctgcacccagccccgcagagtggcggccatgtcg
gttgccaagcgggtcagtgaagagatgggggtgcatctgggagaggaggtgggctatgcc
atccgctttgaggactgcacatccgagaacacagtgatcaagtacatgaccgatgggatc
cttcttcgtgagtcgctgcgagaggctgacctggacaactacagtgctatcatcatggat
gaggcgcatgagcgctcactcaatactgacgtgctctttggcctgcttcgggaggtggtg
gcccgacgctcagatctgaagcttgttgttacttcagccaccatggatgcagataagttt
gcctccttctttgggaacgttcccattttccacattcctgggcgcactttccctgttgat
attcttttcagcaagaccccacaggaggattatgtggaggctgcagtgaaacaagccctg
caggtccatttgtctggtgctcctggagacatccttgtcttcatgcctggccaagaggac
atagaggtgacctcggagcaaattgtggagcaccttgaggagctggagaaggcacctgct
cttgctgtactgcctatctattctcagctaccgtcagacttgcaggccaagatcttccag
aaggctccggatggagtcaggaagtgcattgttgccactaacattgcagaaacctcactg
acagtggatggcatcatgtttgtgattgactctggctactgcaagttgaaggttttcaac
ccccgtataggcatggatgcactgcagatctaccccatcagtcaagccaatgccaatcag
agggcaggccgagctggccgaacaggcccaggccactgcttcaggctctacacccagagt
gcctacaagaatgagctgctgacaaccacggtgcccgagatccagcgcaccaaccttgcc
aatgtagtgcttttgctcaagtccctgggcgtgcaggacctcctgcagttccacttcatg
gatccaccccctgaggacaacatgctgaactccatgtaccagctgtggattctgggggcc
ctggataacacaggtggtctgacctcaacaggacgtctcatggtggagttcccactggat
cctgcactctccaaaatgctcattgtctcctgtgacatgggttgcagctctgagatcttg
ctcattgtctccatgttgtctgtgcctgccatcttttatcggcctaagggccgagaggag
gagagtgaccaagtgagggagaaatttgctgttccagagagtgatcacttgacttacttg
aacgtctacctgcagtggaagaacaacagctattctacactgtggtgcaaccagcacttc
atccatgccaaggccatgcggaaggtgcgagaggtgcgtgcccagctcaaggacattatg
gttcagcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntggtaccgactgggatgttgtc
aggaagtgcatctgtgctgcatatttccatcaagctgcaaagctgaagggcattggggag
tatgtgaacatccgcacaggcatgccctgccacctgcaccccacgagctctctgtttggc
atgggctatacaccagactacattgtctatcatgagctggtcatgacaaccaaggaatac
atgcagtgtgtcactgctgtggatggagagtggctggcagagctgggccccatgttctac
agtatcaaacatgctggcaaatcacgccaggagaaccgccgccgtgccaaggaggaagtg
tctgctatggaggaagagatggctttggctgaggagcagctgcgggcccgccgggaggaa
caggaacgccgtaacccgctgggcagttcaagatctactaaaatctacacccctgggcgg
aaggagcaaggggagcccctgacaccacgacgcaccccagcccgctttggcctctaa
DBGET
integrated database retrieval system
