Falco peregrinus (peregrine falcon): 101919476
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Entry
101919476 CDS
T02856
Symbol
SCN1A
Name
(RefSeq) sodium channel protein type 1 subunit alpha
KO
K04833
voltage-gated sodium channel type I alpha
Organism
fpg
Falco peregrinus (peregrine falcon)
Brite
KEGG Orthology (KO) [BR:
fpg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fpg04040
]
101919476 (SCN1A)
Ion channels [BR:
fpg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101919476 (SCN1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
IQ
SieB
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
101919476
NCBI-ProteinID:
XP_005234698
LinkDB
All DBs
Position
Un
AA seq
2019 aa
AA seq
DB search
MEQSVLVPPGPDSFQYFTRESLAAIEQRIAAEKAKNSKQDRKDNDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDMDPYYINKKTFIVLNKGKAIFRFSATSALYVLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNFTLETNITSQLNSTI
GENGTLVNSTVAPFDWKGYIEDESHFYFLEGQNDALLCGNSSDAGQCPEGYTCVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEAAQAAAVAAAAVTASAESREPS
AGGEPGGLSESSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRR
KGFRLSIEGNRLTYEKKYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDIGSENDFA
DDEHSTFEDNDSRRDSLFVPRRHGERRNSNISQASRSSRMLAVFPVNGKMHSTVDCNGVV
SLVGGPSVPTSPVGQLLPEVIIDKPATDDNGTTTETEMKKRISSSFHVSMDYLXXXXXXX
XXXXERAMSIASILTNTVEELEESRQKCPPCWYKFANIFLIWDCSPHWLKVKHIVNLVVM
DPFVDLAITICIVLNTLFMAMEHYPMTEEFNNVLSVGNLVFTGIFTAEMFLKIIAMDPYY
YFQEGWNIFDGFIVTLSLVELGLQDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNS
VGALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKIASDCVLPRWHMQDFFHSFLIVFR
VLCGEWIETMWDCMQVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAVTDDD
NEMNNLQIAVARMQKGIDYVKRKAREFIQKAFVKKQKALDEIKPLDDLNNKNSCISNHTT
VELSKDHDYIKDVNGTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFEN
LNTEEFSSESDLEESKEKLNSSSSSEGSTVDIGLPAEEQPEAEPEEAQEPEACFTEGCVR
RFKCCQVSIEEGRGKQWWNLRKTCFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKT
IKTMLEYADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYS
ELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVN
LFAGKFYYCVNTTTDERFEVDQINNFSQCEELIKNNQSARWKNVKVNFDNVGFGYLSLLQ
VATFKGWMDIMYAAIDSRDVLMQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFN
QQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTQQVFDISI
MILICLNMVTMMVETDDQSEEMENILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIF
DFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSL
PALFNIGLLLFLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWD
GLLAPILNSGEPDCDPNKAHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILE
NFGVATEESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKLSDFAAALEPPLHLPKPNKV
QLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMASNPSKASYEPIT
TTLKRKQEEVSAVIIQRAYRRHLLKRTVKQASFIYNKNKAEGGAGQGVKDEILIDKLHEN
SFTEKTDITASTAVCPPSYDRVTRPVKEKHEKEDKDVQK
NT seq
6060 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtcagtgcttgtaccaccaggaccagacagcttccaatacttcactagagag
tctctcgcagctattgaacaacgcattgctgcagaaaaagctaagaattctaaacaagat
cgtaaagacaatgatgatgaaaatgggccaaagccaaacagtgacttggaggcaggaaaa
acacttccatttatatatggtgacatacctccaggaatggtgtctgagcccttggaagac
atggacccatattacatcaataaaaaaacctttatagtattgaataaagggaaggcaatc
ttccgattcagtgccacctctgccctgtatgttttaactcccttcaatcctcttagaaaa
atagctattaaaattttggtacattcattattcagcatgcttatcatgtgcacaattttg
accaactgcgtatttatgaccatgagtaaccctccagactggacaaagaatgtagagtat
acattcactggaatttacacatttgaatcactcataaaaatcattgcaaggggcttttgc
ttagaagattttacttttcttcgagacccatggaactggcttgatttcactgtcattacc
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcttgaagactattgtgggagcc
ctaattcagtctgtgaagaagctctcggacgtaatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgcctgcag
tggcctccagacaattttactttggaaacaaatattacttcccagctaaacagcaccata
ggtgaaaatggtacattagttaattcaacagtggctccatttgactggaaggggtacatt
gaagatgaaagtcatttttattttctggaagggcaaaatgatgctctgctttgtggaaat
agttctgatgctgggcagtgcccagaaggatatacatgtgtgaaagctggtagaaacccc
aattatggctatacaagttttgacaccttcagctgggctttcttgtcactgtttcgcttg
atgactcaagacttctgggaaaacctttatcaattgacactgcgtgctgctgggaaaaca
tacatgatattttttgttctggtgatttttctgggttctttctacctgatcaacttgatc
ctggctgtggtcgccatggcctatgaagaacagaatcaagcaaccatggaagaagcagag
cagaaagaggcagaatttcaacagatgctggaacaactgaagaagcaacaagaagcagct
caggcagcagcggtggcagcagcagcagtaacagcatccgcagagtccagggagcccagt
gctgggggagaaccaggagggctctcagaaagttcctcagaggcatcaaaattgagctca
aagagtgcaaaagagaggagaaataggaggaaaaaaagaaaacagaaagaacagtctgga
ggagaagaaaaagatgaagatgaatttcacaagtctgaatcagaagacagcatcagaagg
aaaggtttccggttatctatcgaaggcaatagactgacatatgaaaagaagtattcttct
ccacatcagtctttgctgagcattcgaggctccctgttttccccaaggcgcaacagcaga
acaagtcttttcagcttcagaggtagagcaaaggatataggatcagaaaatgactttgct
gatgatgagcacagcacttttgaagacaatgatagcagaagagattctctctttgtgcca
cgcagacacggtgaacggcgcaacagtaacattagtcaggccagtaggtcatccaggatg
ctggcagtgtttccagtgaatgggaagatgcacagcactgtggattgcaatggggtggtt
tccctggttggtggcccatctgttcctacatcgcctgttggacagcttctgccagaggtg
ataatagataaaccagctactgatgacaatggtaccactacagaaacagaaatgaagaag
agaatatcaagctcttttcacgtttctatggactacctggannnnnnnnnnnnnnnnnnn
nnnnnnnnnngggaaagagccatgagtattgctagcatcctcacaaacactgtggaagaa
cttgaagaatcaagacagaaatgcccaccatgttggtataaatttgcaaatattttcttg
atctgggactgcagtccgcattggttaaaagtaaaacatatcgtcaacttagtggtaatg
gacccatttgttgacctggctattacaatttgcattgttttgaatacactctttatggct
atggaacattatccaatgaccgaagaattcaataatgtactttcagttggaaacctagtc
ttcactggaatcttcacagcagaaatgtttctcaagataattgcaatggatccttactac
tattttcaggaaggctggaatatttttgacggttttattgtaactcttagcttggtggag
cttggtcttcaagatgtggaaggactctcagttcttcgatcattcagactgttacgagtt
ttcaaattggcaaaatcttggccaacactaaatatgctgataaaaattattggcaactca
gtgggggctctggggaatctgaccctggtgctggccatcattgtgttcattttcgctgtg
gttgggatgcagctgtttgggaaaaactacaaggaatgtgtctgcaaaattgcaagtgac
tgtgtgcttccacgctggcacatgcaagactttttccactcttttttgattgtatttcga
gtgttgtgtggagaatggatagaaacgatgtgggactgcatgcaggtcgcaggccaagcc
atgtgccttactgtcttcatgatggtcatggtgattggaaaccttgtggtattgaaccta
tttttggccttgctcttgagctcatttagtgcagacaaccttgccgtgacagatgatgac
aatgaaatgaataatctccaaattgctgtagcaagaatgcagaagggcatagattatgtg
aaaagaaaagcacgtgaattcatccaaaaagcctttgttaaaaaacaaaaagctttagat
gaaatcaaaccgcttgatgatttgaacaacaaaaatagctgtatttccaaccatacaacc
gtggaactaagcaaggaccatgactatattaaagatgttaatggaacaactagtggcata
ggcacaggtagcagtgtagaaaaatacatcattgacgaaagcgattacatgtccttcata
aacaacccaagcctcactgtgacagtgcccattgctgtgggtgaatccgactttgaaaat
ctaaacacagaggaatttagtagtgaatcagacctggaagaaagcaaagagaagttaaat
tcatctagttcatctgaaggtagcacagttgatatcggacttcctgcagaagagcaacca
gaagctgaacctgaagaagcccaggagccagaggcctgcttcacagaaggctgtgtacga
agattcaagtgctgtcaagtaagtatagaagaagggagaggaaagcagtggtggaacctt
agaaaaacctgcttcaagattgttgaacacaactggtttgagactttcattgtctttatg
attctcctcagtagcggagctctggcttttgaagacatatatattgaacagcgtaaaact
atcaagaccatgctggaatatgctgacaaggtcttcacttacatcttcattctggaaatg
ctgctgaagtgggtggcctatggctatcaaacatactttactaatgcctggtgctggctg
gacttcctgatagttgatgtctctttggttagcttaacagcaaatgcattgggttactct
gaacttggtgccattaagtcccttaggacactaagagctttgagacctctaagagctttg
tcacgttttgaaggcatgagggtggttgtgaatgcccttttaggagcaattccatccatc
atgaacgtgcttctcgtttgtcttatattctggctaattttcagcatcatgggagtaaat
ctgtttgctgggaaattctactactgtgttaacaccacaactgatgaaaggtttgaagtc
gaccaaatcaacaattttagtcagtgcgaggaactcataaaaaacaatcaaagtgcccga
tggaaaaacgtgaaagtaaactttgataatgtaggatttgggtatctttctttacttcaa
gtagctacatttaaaggctggatggatattatgtacgcagctattgactcgagagatgta
ttaatgcaacccaagtatgaagacaacctgtacatgtacttgtattttgtcatctttatc
atttttgggtcttttttcaccctaaaccttttcattggtgtaattattgataacttcaat
cagcaaaaaaagaagtttggaggtcaagacatatttatgacagaagagcagaagaaatac
tacaatgcaatgaaaaagctgggatccaaaaaaccacaaaaacctataccaagaccaggg
aacaaattccaaggcatggtctttgattttgtgacacagcaagtatttgacatcagcatc
atgattcttatttgtcttaacatggttaccatgatggtagaaactgatgaccagagtgaa
gaaatggaaaatattttgtactggataaacctggtgtttattgttcttttcactggagaa
tgtgtcctgaaattaatttcacttcgccattactatttcactataggctggaacattttc
gattttgtagttgtcatcctttcaatagtaggtatgtttttagctgagatgattgagaag
tattttgtgtcccccacactattcagagtcatccgacttgccagaatcggtcgaatcctg
cgcctcattaaaggcgctaagggaatccgcactctgctttttgctttgatgatgtcgctt
cctgctttgttcaacattggcctgctgctcttcctggtcatgtttatctatgcgatattt
ggcatgtccaactttgcctatgtcaagagggaagctggtatagatgacatgttcaacttt
gaaacgtttggcaacagcatgatctgcctctttcaaattaccacgtctgctggctgggat
ggtttgctagccccaattcttaacagtggggagccagactgtgaccctaacaaagctcac
ccagggagctccgttaaaggcgactgcggcaacccttccgttgggattttcttcttcgtc
agctacattatcatatcgttcctggtagtggtgaacatgtacattgctgtgattttggag
aactttggtgttgctactgaagaaagcgctgaacccttgagtgaggatgactttgagatg
ttctatgaagtctgggagaagtttgatcctgatgcaacacagtttatggaatttgagaaa
ttgtctgactttgcagcagcacttgagcctcctcttcatctacccaaaccaaacaaagtc
cagcttattgcaatggatctgcccatggtaagcggtgacagaattcactgccttgacatc
ttgtttgctttcacaaagcgtgttttgggggaaagtggggagatggatgccctcagaata
cagatggaagatcggtttatggcatccaatccttcaaaagcttcctatgaaccaattaca
actacattaaaacgaaaacaggaggaggtatctgctgtcattattcaacgggcttataga
cgtcaccttttaaaacgaacagtaaaacaagcttcctttatctataacaaaaacaaagct
gaaggaggtgctggtcagggtgtgaaagatgaaatccttattgacaagttacatgaaaac
tcatttacagagaaaactgatataaccgcatcaacagcagtttgtccaccttcttatgat
cgcgtaacaaggccagtcaaagaaaagcatgaaaaggaagacaaagatgttcagaaataa
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