KEGG   Falco peregrinus (peregrine falcon): 101921187
Entry
101921187         CDS       T02856                                 
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
fpg  Falco peregrinus (peregrine falcon)
Pathway
fpg03030  DNA replication
fpg03410  Base excision repair
fpg03420  Nucleotide excision repair
fpg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fpg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101921187 (RFC1)
   03410 Base excision repair
    101921187 (RFC1)
   03420 Nucleotide excision repair
    101921187 (RFC1)
   03430 Mismatch repair
    101921187 (RFC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fpg03032]
    101921187 (RFC1)
   03400 DNA repair and recombination proteins [BR:fpg03400]
    101921187 (RFC1)
DNA replication proteins [BR:fpg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101921187 (RFC1)
DNA repair and recombination proteins [BR:fpg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101921187 (RFC1)
SSDB
Motif
Pfam: RFC1 BRCT AAA PTCB-BRCT AAA_14 Rad17 AAA_22 BRCT_2 AAA_30 AAA_5 RuvB_N AAA_18 AAA_17 RNA_helicase AAA_16 AAA_33 AAA_7 nSTAND3 NTPase_1 AAA_19
Other DBs
NCBI-GeneID: 101921187
NCBI-ProteinID: XP_005243301
LinkDB
Position
Un
AA seq 1161 aa
MAATPGGSDIEQDIRKFFGVVPPGKRQECETLKKSEKIKNGEGPSSGKKREKESKVNNSS
SEDDSKRKRTNKKKRIIYDSDSEEEIQPVKKPKQTSEKKPAPSKLGKVRKRDPVAYISET
DEEDDFVKKRISVKPKENGMSAVGCQGTAAVKKEDVKPQAKIKPLSSVKQTPTSALDYFG
TSSVQRSEKKLVASKRKEPSQSSDSTLDDEAIARQLQLEEDSELERQLHEDEEFAKTLAM
LDETPQKKKARKDSGGEQTVLSVKSSPNMTERYKQSEGVKSTNSTGEAKNYTAKQQTKSE
HSKGPHVSSQSPGGKTAKELMNKTSPLKPSSRLVSLKQKEEIAEKERGAQSLVSKEKNTR
GKEKTTPKKEKISPKKTESVSPEDSEKKRINYQAYRSFLNREGPKALGSKEIPRGAENCL
EGLTFVITGVLECIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDCGQSKCEKASTLGT
KVIDEDGLFDLIRTMPGKKSKYELAAETEAKKAAPVKTPQKAEAGKRNFSPLKREADNKK
CRSTPQKGDTVKSAKKETVAVRKLMDFKRQTVEEKEASKPKGNLVSEINEDKTEKLLWVD
KYKPVSLKAIIGQQGEQSCANKLLRWLRNWHKNTSEDGQAKTNKTGGKDDATGFKAALLS
GPPGVGKTTTASLVCKELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGTSSSV
SGKHVLIMDEVDGMAGNEDRGGIQELIGLIRHTKIPIICMCNDRNHPKIRSLVHYCFDLR
FQRPRLEQIKGAMMSIAFKEGLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKSLTYD
EAKTDASRAKKDIKLGPFDVVRKVFAAGEEVARMSLTDKLDLFFHDYSLAPLFVQENYVH
VKPAAAGGNLKKYLMLLSRAADSICDGDIVDKQIRSKQNWNLLPTQGIYASVLPGELMRG
HMTQFPVFPSWLGKFSSTGKHDRIVQELAMHMSLRTQTGKRTVNMEYLPYLRDALVQPLK
DFGADGVQEAVTFMDSYCLVKEDVENIMEISTWGGKPSPFSKLDPKVKAAFTRAYNKEAH
LTPYSLNSVKISKRQSGSASALGLNEELNVEEIQSDEDEKDTVESDAMIKKKTPKSSKLP
KREKNEETTKKEGKRKEKTRH
NT seq 3486 nt   +upstreamnt  +downstreamnt
atggctgctacccctggaggtagtgatattgagcaggatatccggaaattctttggcgtt
gtacctcctggaaagcgacaagaatgtgagactctgaaaaagagtgaaaaaattaaaaat
ggtgaaggaccttccagtgggaagaaaagggaaaaagagtctaaggtaaataattcatcc
agtgaagatgattccaaacgaaagcggacaaacaagaaaaaaagaataatctacgattca
gattcagaagaggagatacagccagtaaaaaaacccaagcagacatctgagaaaaaacca
gctccttcaaaacttggtaaagttcgaaagcgggatcctgttgcttacatttcagaaaca
gatgaagaagatgactttgtcaagaaaagaatttcagtgaaaccaaaggagaatgggatg
tcagcagttggttgtcaaggaacagctgcagtgaaaaaggaagatgtaaaaccacaagct
aaaatcaaaccattatcttcagtgaaacagactcctacctcagcacttgattactttggg
acaagtagtgtccagcgatcagaaaagaaactggtagcaagtaaaaggaaagaaccttca
caaagcagtgacagcacattagatgatgaggccattgctaggcaactgcagcttgaagaa
gattcagagctggagagacagctgcatgaagatgaagaatttgctaaaactttggccatg
ttggatgaaacaccacagaagaagaaggctcggaaagattcaggaggagagcaaacagtg
ctgagcgtcaagagcagtcctaacatgacagaaagatataagcagtcagaaggagtgaaa
tcaacaaactcaacaggtgaagcaaagaattacactgcgaagcagcaaactaaatctgaa
cattcaaaaggccctcatgtatcctcccaatcaccgggtggtaaaacagcaaaagagttg
atgaataagacctcgcctttgaaacctagttctaggcttgtgtctctgaaacaaaaagaa
gagattgctgaaaaggaaagaggtgctcaaagtttggtatctaaagaaaaaaatactcga
gggaaagaaaagacaacaccaaagaaggagaaaatttctcccaagaagactgagtctgta
agtcctgaggactctgaaaagaagcgaattaattatcaagcctaccgaagcttccttaat
cgtgagggtccaaaagcgctggggtccaaagaaatacctcggggtgctgaaaactgcttg
gaaggcctgacattcgtaattacaggtgttctggagtgtattgaaagagatgaggccaag
tctctgattgaacgttatggaggaaaagtaactggtaatgtcagcaagaagacaaactat
ctggttatggggcgagactgtggccagtctaaatgtgagaaggcatcaactttagggaca
aaagttattgatgaagatggcctgtttgatcttattcgaactatgccaggcaaaaagtcc
aaatatgagctggcagctgaaacagaggcaaaaaaagcagcacctgtaaagacaccacag
aaagcagaagctggaaaaaggaattttagccctctcaagagagaagctgataataaaaaa
tgcaggtctactcctcaaaaaggagatactgtcaaatcggccaagaaagaaacggttgct
gttcgaaagcttatggattttaaacggcagactgtagaggagaaagaagcctcaaaacct
aaggggaacttggtttctgagataaatgaagacaaaacagagaaattgctatgggtagat
aaatacaagcctgtatctcttaaggcaataattggacagcagggtgagcaaagctgtgcc
aataaactcctccgatggctcagaaattggcacaagaatacctcagaagatggacaagca
aagaccaataaaactggaggcaaagatgatgctactggttttaaagcagcattactttct
ggtccgcccggagttggtaaaactactacagcttctttggtttgtaaggagctggggtac
agctatgtggagctgaatgctagtgacactcgcagtaagaacagtctgaaggaagtagtt
gccgaatcgcttaacaacaccagcatcaaagacttctgttctggcacatcctcatcagtt
agcgggaaacatgtattgatcatggatgaagtggatggtatggcaggcaatgaagacaga
ggagggattcaggagttgattggtttgattagacacacaaagataccaatcatctgtatg
tgtaacgatcgcaaccatcctaaaattcgttccttggtccactactgttttgatcttcgt
tttcagagacctcgtctagaacagattaagggtgccatgatgtctattgcatttaaagaa
ggtttaaaaattccaccacctgctatgcaagagataatcctggcagcaaatcaggacatc
agacaggttttacataatcttaacatgtggtgtgcaaaagataaatcactgacgtatgat
gaggctaaaacagatgccagcagagccaaaaaggatatcaaactgggcccttttgatgtt
gtccggaaggtttttgctgctggagaggaggttgctcgtatgtctcttacagacaaattg
gatcttttcttccatgattattccctagcgcctctctttgtccaggagaactatgtacat
gtgaaaccagctgccgctggaggaaatctgaaaaagtacttgatgctcttgagtagagca
gctgatagtatatgtgatggtgatattgtggacaaacagattcgtagcaagcaaaactgg
aatcttcttccaacacagggtatttatgcaagcgtcctcccaggggagctgatgagaggt
cacatgacccagtttcctgtctttcccagctggctggggaaattttcatccacaggcaaa
cacgatcgtattgttcaagaactggcaatgcacatgagcctcagaacccagacaggcaag
aggacagtaaatatggagtatttgccgtacttgcgagacgcgcttgtccagcccttgaaa
gactttggagcagatggtgtacaagaagctgtaacatttatggactcttactgcttggtg
aaagaagatgttgaaaatatcatggaaataagcacatggggaggcaaacccagtcctttt
tcaaagctggatcccaaggtcaaagcagcttttacacgtgcctacaacaaggaggcacat
ctgactccatattcacttaattctgtcaagatatctaaaaggcagtcggggtctgcatca
gccttgggactgaatgaagaactgaatgtggaagagatccagtctgatgaggatgagaaa
gatactgttgaaagtgacgcaatgattaagaaaaaaacccctaagtcttccaagctgcca
aaaagagagaaaaatgaagaaacaacaaaaaaagaagggaagagaaaagagaaaacaaga
cattaa

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