Falco peregrinus (peregrine falcon): 101923013
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Entry
101923013 CDS
T02856
Symbol
SPG11
Name
(RefSeq) spastic paraplegia 11 (autosomal recessive)
KO
K19026
spatacsin
Organism
fpg
Falco peregrinus (peregrine falcon)
Brite
KEGG Orthology (KO) [BR:
fpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpg03400
]
101923013 (SPG11)
DNA repair and recombination proteins [BR:
fpg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101923013 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
DCA16
Motif
Other DBs
NCBI-GeneID:
101923013
NCBI-ProteinID:
XP_013156256
LinkDB
All DBs
Position
Un
AA seq
2427 aa
AA seq
DB search
MEGAKQELRVLLAPLLGEAQCCLRDAARVRLSRGQDALGSLLVPGGIYLESLVPGGGGRA
RGSVLPGAWADFMWENTEDLQADKTKILALGKSNELFVYEFTREDGKYNPVSLHSCKEDT
LKKHLEVKNISLSSIFSLRILSFKNNKCILLLNKFIVVHLTFPGEDSPLEKCDCFTLDLP
PQVLERVTDTYFCRGILFLLDSSGWIYVFDSLDGVNLGNINVALCQGDVQGEDGSPAITS
PLTAVKVAHDLSVAVIISSANYAISVDLNMYFRQFPGHLLCKRDCENFPVKPPEGLDEDD
LASSDYSMELLSSPFRTDRSWKAHLSSLRDTVRRRQPGSSDLVNDLNLPWYQFFTHLDDH
DPEIYENSEKMVAFVPRAVTWAPSKPLQSDGANLSNTGQQWKQIPMEAIQEVVKLECKLV
TGVKAIFGVLTNNNGLTLALWDFESQDVTYYRFGKNSVYVDCSEEVPLCLLLTERGLSLV
LFGLTQEEFLNRLMIYGSAGVVDSVCHLNGWERCSIPIHALEAGLENLQLDTVDLFLKSK
ESLLNLSAPCSGPEQSTDSASQSYLKNLEELRPALNLLCSAIKENDMEPHSKHFSEQLLN
LTLNFLTKQLEEIFVHTEEPDEFLQKGADILTDYIIKLRKFMRRYPQPQIPAVHMENDLD
EDLPVLEESHVWEKLTPEEVIAEAILSNKMPEAQAFFQMHHHPAHSLQAFIQTGLNLVYD
RLLKNNTREAAELLRNMGFDVKEELRKICFYTVDKHVRDLLVKVLREENYFSEKEKKMID
FVHQVESFYSESFQENKEIQSLSSFKNWRKEQDFSRHTAVLDSLLSYDRHRVHNRRVRVM
FNWAQWWDELIQEMILLPRKPRQELKTCNPEVLWMHLTAQHDWLNICSWIEESEPNQTLC
GQANWPPLTPDIIDRNMLCSSYMRNDILNKLARNGIFVCSELEDFELLLQRLSYLGGVLQ
NPHPVPKHSTANGLDFHARFVLHCLEHNLQYLLYTYLDYYSLTPSNCSILDNTELHEAHP
WFEFLVQCRGVASNPRDPKMIFQASLANAQILIPSNQASVSSMLLEGRTLLALATTMYAP
GGIDQVLQNEDTEKPLKKVDPQLLKMALTPYPKLKAALFPPCTSHGILPPDISLYHLVQS
LVPFDPTKLFGWQSTNTLAVSDASSDFPHFSSPELVNKYAVMERLDFLYYLHHGRPSFAF
GTFLVQQLVKSKSPKQLIQQAGNEAYILALSFFSVPSVGAACVCFLELLGLDSLKLRVDL
KVANIIFSYRTRNEESQHNQIRESLVDKLTKLADGEKAAAAAVLLSLEEAFWDAVEQQGM
KKTSSDSRRQWSLVMQFCKLHNIALSTSYLKECAKSNDWLQFIIQTQLYSYQPDQVISIL
QDFTPNLQDHLMLALEKLSFLCPDTGSPENSAASVFKSKYADSLFQILFQCQGNSNPSCY
LLTEGLRKHAPILSVLAACFPDANIIHCLCVWIITTVDDTTRAEATNHIQNSAENHKWDL
HDLSVIWKVFLRKQKSKTLLNGFQLFLKDSPLLFILEMYELCMNCKKYNEAKSKLDKFQE
SLTKLKTEDEAAASELPVQWLESQALFLLELMMQQCRTEYELGKLLQLFAAADNLLLNGP
YVKKLCALSETLKDSSISINHAILTSFNMETFQSECRSILEQLQEKGMFSLAREVAALAE
LPVDNVVMQEGLRDLHRLRDIGQWHQNQTRIEFWKKCNDNFMKNSISSEAASCFFIDQAN
TVFEPSAHEKINSIMERRLLLTLAGHWLAKNDSVSLHRLEEIEKQIWVCRIAQQTLSADE
GSAKSRFSSPVVANGDLTFDNLAKEFSFSKLPALNTPKYLKLEGLAFRESQQTLTSDEEE
SLKFLIGCLLDEGSVHEASRVCQYFHFYSRDVALVLHCRALAAGETDLDKLHTDIQTLLA
AREERSESSASQPSRVPSTSSLEDWTHIMSPSLDDQVITSLKALTDECVHGRNYCRQVLC
LYELSKELNCSYSEISAHDPEKVLRAILSSHQPDRCRKAQAFMTTQGLQPETVAELVAEE
IMQELLASSEGKGQKQVLNPAAESQAFLQLAKLCQDHTLVGMKLLDKISSVPRGELSCIT
ELLILAHNCFSLTCHMEGITRVLQAARLLTDEHLAPNEEYGLVVRLLTGIGRYNEMTYIF
ELLHEKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMIALCFSMCREIGENHE
AAACIQLKLIESQPWEESLQDIPNLKKLLMKALTLFIDAAESYSKDSCVRQSLRCSRLTK
LITLQLHFLNTGQSTMLINLSRQSLMDSIMSLPRFYQAAIVAEAYDFVPDWAEVLYQQVI
TKGDFTYLEEFKQQRPLKPSIFEEIAKKVKQHPPTDGALKNLKKLLTYCEDIYTYYRLAY
DNKFYDVVNTLLKDAQTGCCLNDMLAN
NT seq
7284 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggcgaagcaggagctgcgtgtgctgctggcgcccctcttgggggaggcgcag
tgctgcctgcgggacgcagcccgggtccggctgagcaggggtcaggacgctctggggagc
ctcctggtccctggtgggatctacctggagtctctggtgccgggcggaggcggccgggcc
cggggcagcgtcctcccgggagcctgggctgacttcatgtgggagaatacagaagatctg
caagcagacaagacaaaaatactggctcttggtaaaagtaatgaactgtttgtctatgaa
tttactagagaagatggaaaatacaacccagtttccctgcacagttgtaaggaagataca
cttaaaaagcaccttgaagttaaaaacattagtctgtcttcaattttctccttgaggata
ctgtcttttaaaaacaacaaatgcatacttctgctcaataagtttattgttgtgcatctt
acttttcctggagaagactcacccctagaaaaatgtgactgctttacccttgatttgcct
ccacaagttctagaaagagtaacagatacatacttctgcagggggatcctgtttctatta
gacagttctggctggatttatgtatttgactctcttgatggtgtaaatctaggaaatatt
aatgtagcactctgccagggagacgtgcagggtgaggacgggagtccagccatcacatca
ccactcactgcagtgaaagtggcacacgatctcagtgttgctgtgatcatcagttcggcc
aactatgccatttcggtggatctaaacatgtacttcagacagttccctgggcatttgctc
tgtaagagagattgtgaaaattttccggtgaagcctcctgaaggacttgacgaggatgac
ctcgctagttctgactatagcatggagcttttgtcatcgcctttccgaacagacaggtcc
tggaaggcacacttgtcctcactacgtgatacagtaaggagaagacaaccaggttcttca
gatttggtgaatgacttgaatttaccttggtatcagttttttactcatcttgacgatcat
gatcctgaaatctatgaaaattctgagaagatggtggcttttgttccacgggctgttaca
tgggctccttcgaaaccattgcaaagcgatggtgcaaacctcagcaacacaggacagcaa
tggaaacaaatccccatggaagccatacaagaagtggtaaaactggagtgtaaattggta
actggagttaaagccatttttggagtattaacaaacaacaacggattgactcttgctctc
tgggactttgagtcacaagatgtgacgtactaccgcttcggcaaaaacagtgtttatgtg
gattgcagtgaagaggtgccattgtgtctgcttctgacagagcgtggtctctccttagtt
ctgtttggtttaactcaagaagagtttttgaatagattgatgatctatggcagtgctgga
gtcgtagattctgtttgtcatctcaatggatgggaacgatgttcaattccgatacatgca
ctagaggcaggtttggaaaatcttcaactagacacagtagacttatttttaaaaagcaaa
gaaagtcttctcaatctgtctgcaccgtgctctgggcctgaacagtctactgatagtgca
tcccagtcttacctaaaaaatttggaagagctgaggccagctttaaacttgctttgctca
gcgatcaaagaaaatgatatggagcctcacagtaaacacttttctgagcagctgctaaac
ctcacattgaatttccttaccaagcaacttgaagaaatttttgtgcacacagaggaacct
gatgaattcctgcagaagggtgcagatattttaactgattacattattaaacttagaaaa
tttatgagaagatatcctcaaccacaaatacctgcagtacacatggaaaatgatcttgat
gaagacctacctgtattagaagaaagccacgtgtgggaaaaactgacaccagaggaagtc
attgctgaagccatcttaagcaacaaaatgccagaggcccaggccttcttccagatgcat
caccatcctgctcacagtcttcaggcatttattcagacaggtttgaatctggtctatgat
cgtcttctgaagaacaataccagagaggccgcagaacttttgagaaatatgggctttgat
gtgaaggaggaattgcgtaagatatgtttctacacagttgataaacatgtccgagatttg
ttggtgaaagttttacgagaagaaaattatttttctgaaaaagagaagaaaatgatagac
tttgtgcatcaagttgaaagcttttactcggaatccttccaagaaaataaagagattcaa
tctctttccagtttcaagaactggagaaaagaacaagacttttccagacatacagctgtt
ttagactcactgttgagttatgatagacatcgggttcacaataggagagtcagagtgatg
tttaactgggcgcagtggtgggatgagcttattcaggagatgattcttctccccagaaaa
ccacgccaagaactcaagacatgtaatcctgaagttctttggatgcacttgacagcccag
catgattggcttaatatttgttcatggattgaagaatctgagcccaaccagactttgtgt
ggacaagctaactggccccctcttactccagacattattgaccggaatatgttatgtagt
agctatatgagaaatgatatattaaacaagctggctagaaatggaatttttgtctgctct
gagttagaagattttgaacttctgctccaaagactgtcttaccttgggggagtactgcaa
aatcctcaccctgttccaaaacacagcactgcaaatggtttggacttccatgctcgtttt
gtccttcactgcttagaacataatttacagtatctgttatacacttacttagactattac
agtttaactccttcaaattgctctattctggataacacggaattgcatgaagcacatccc
tggtttgaattccttgtgcagtgtcgaggggttgccagtaatccacgagatccaaagatg
atttttcaggctagtctagcaaatgctcagatcttgattcctagtaatcaagccagtgtg
agtagcatgctcctggaaggacgtacactattagcacttgctactacaatgtatgcgcct
ggaggtattgatcaggttcttcagaatgaagatacggaaaaacctctaaagaaagttgat
ccacagctcttaaaaatggcattgactccttaccccaaactcaaagctgctcttttcccc
ccgtgtacctctcatggaattttgccacctgacatctctctgtaccatcttgttcagtca
ttagtgccctttgatcccacaaaattatttggctggcagtcaacaaatactcttgctgta
tcagatgcatcaagtgactttcctcatttttcatcacctgaactggtgaacaaatacgct
gtcatggaacgactggattttttgtactatttgcaccatggacgtccatcgtttgctttt
ggtacatttttggtccagcagttagtaaagagcaaatcccccaaacagttgattcagcaa
gcaggaaatgaagcctacattttagctctttctttcttcagtgtaccttcagtaggagca
gcctgtgtgtgttttctagaattgctcggtctcgacagcctcaaactcagggttgatctt
aaagttgcaaacataattttcagttacagaactagaaatgaagaatctcagcacaatcaa
ataagagaatctttggttgacaagctaacaaaattggctgatggtgaaaaagcagcagca
gcagcagttcttttgtccttagaagaagccttttgggatgcagttgagcagcaaggaatg
aagaagacgtctagtgactctagaaggcagtggtctttggtaatgcagttctgtaaactc
cataatattgccctgagtacatcttacctaaaggaatgtgccaaatccaacgactggctg
cagttcatcatccaaacccagctgtacagctaccagccagatcaggtcatttctatcctt
caagatttcactcccaacttacaagatcacttgatgctggcgttggagaagttatcattt
ttgtgtcctgatacagggagtcctgaaaacagtgctgccagtgtgttcaagagcaaatat
gcagatagtctctttcaaatcctttttcaatgtcaggggaactcaaacccttcatgttac
cttttgactgaaggactgagaaagcacgctcccattctgagtgttttagcagcatgtttc
ccagatgcaaacattattcattgtctctgtgtttggataattactactgtggatgatact
accagagctgaagcaacaaatcatattcaaaactcagcagaaaatcacaaatgggatctt
catgacctatcagttatctggaaagtctttttaagaaagcaaaagagtaaaacgctttta
aatggcttccagctctttttaaaggattcccctttactgttcatactggagatgtatgaa
ctatgtatgaactgtaaaaaatacaatgaagctaaaagcaaattggacaagtttcaggaa
agtctcacaaagcttaaaactgaagatgaagcagcagcctcagaattacctgtgcaatgg
ttggaatcgcaagcattgtttcttcttgaattgatgatgcagcaatgtagaacagaatat
gaattaggaaaactcttacagctgtttgctgcagcagataatcttctactcaatggccct
tacgtgaagaaactctgtgcactcagtgagaccctgaaggattcctccatatcaattaat
cacgccatcctaaccagtttcaatatggagacatttcagagtgagtgcagatcaattctg
gagcagctacaagagaaaggaatgttctccctggctcgggaggtagcagcactcgctgaa
ttgcctgtggacaacgtagttatgcaagagggtctaagagatctacatcgtttaagggac
attggacagtggcatcaaaaccagacaagaattgaattctggaaaaaatgtaatgacaac
ttcatgaaaaattccatctccagcgaagctgcatcttgtttttttattgatcaggcaaac
acggtatttgaaccttcagctcatgagaagataaacagcattatggagaggcgtctgttg
cttaccctagctggccattggctagccaagaatgactcggtgtcactgcacagattagaa
gaaatagagaagcagatctgggtttgtcgcatcgcacaacaaacgttatctgcagatgag
gggtcggccaagtcgagattttcctcccctgttgtagcaaacggggatcttacctttgat
aacttggctaaggagttttctttttcaaagcttcctgctctgaacacaccaaagtactta
aaactagagggccttgcattcagagagtctcaacagaccttgactagtgatgaggaggag
tcactcaaatttctgattggatgcctccttgacgaaggaagtgtgcacgaagccagccgt
gtttgtcagtatttccatttctacagcagagatgttgcactggtattacattgcagagct
ctcgccgcaggggagactgatctagacaaattacacacagatattcagactctccttgca
gcaagagaggagagatctgaaagcagcgcatctcagcccagcagagtcccaagcacatca
agcttagaagactggacacacatcatgtctccgtctctagatgatcaagtcattaccagt
ctgaaggctctcacagatgaatgtgtccacgggagaaactactgcagacaggttctctgt
ttgtacgaactttctaaggaattgaactgctcctacagtgaaatctcagcccacgaccct
gaaaaagtgcttcgagcaattctgtcatcccatcagccggacaggtgcaggaaagcccag
gcattcatgaccacacagggtctccagcctgaaactgtggcagagctagtggctgaagaa
atcatgcaggaattattggcatcttcagaagggaaaggacagaagcaggttttgaaccct
gcagctgagagtcaggcgttcctacagcttgctaagctgtgccaggatcatacgttggtt
ggcatgaagttgctggataaaatttcctctgtaccacgtggggaactgtcatgcattaca
gaattgctcattttggcccataattgctttagcttgacttgccacatggaaggaatcact
agagttctccaagcagcgcggcttctcacagatgaacatttggcacctaatgaggagtac
ggactcgtggttcgtcttctcactggaattggccgatacaatgaaatgacctatatattt
gagctgctgcatgagaaacactattttgaagtgctcatgagaaagaaattagacccaagc
gggacgctgaagacagctctgctggattacatcaaacgttgtcgcccaggggacagtgaa
aagcacaacatgatagccctttgcttcagtatgtgccgagaaattggagagaatcatgag
gctgctgcttgcatacagcttaaactcattgaatctcagccatgggaggagtctcttcag
gacattccaaatttaaagaaactgctgatgaaagccctgactctgtttattgatgcagca
gaaagttattctaaggactcctgtgttcgccagtccctgcgctgcagtcggctaaccaag
ctgataacactccagctgcacttcctcaacactggtcagagcactatgctgatcaacctg
agcagacagagcctgatggactccatcatgtccttgcctagattctatcaggcagctatt
gtggctgaggcttacgactttgttccagactgggctgaagttctgtatcaacaagtgatc
accaagggagacttcacttacttagaagaatttaaacaacaaagaccactgaagcccagc
atatttgaggagattgccaagaaagttaaacaacacccacctactgatggggctttgaaa
aatctgaagaaattgctcacgtactgtgaggatatctacacgtactacaggttggcttat
gataacaagttctatgatgtggtcaatacgcttctgaaggacgcgcagactggctgttgc
ctcaatgatatgttagcgaactag
DBGET
integrated database retrieval system
