Falco peregrinus (peregrine falcon): 101923290
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Entry
101923290 CDS
T02856
Symbol
DDX42
Name
(RefSeq) DEAD-box helicase 42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
fpg
Falco peregrinus (peregrine falcon)
Pathway
fpg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101923290 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fpg03041
]
101923290 (DDX42)
Enzymes [BR:
fpg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101923290 (DDX42)
Spliceosome [BR:
fpg03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
101923290 (DDX42)
Complex B
101923290 (DDX42)
Complex C
U2 SnRNP specific factors
101923290 (DDX42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
DUF460
Motif
Other DBs
NCBI-GeneID:
101923290
NCBI-ProteinID:
XP_005235891
LinkDB
All DBs
Position
Un
AA seq
943 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFAITPGKKEEPKLSQQSHSAFGTAGSSAAFAKSGPPQLPSFY
KIGSKRANFDEENAYFEDEEEDSSNVELPYIPAENSPTRQQFHSKSADSDSDDDPLEAFM
AEVEDQAARDMKRLEDKDKEKKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
LEYDSDGNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQ
VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPS
GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKV
ISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNPWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSENSDRGNNNSVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLNNQ
KTGSSAAGASGWTSAGSLNSVPTSSAQQNAANPDSPIAAAAAAKGVPGFTSTGNLSSVPT
FPSMGVQGFNNTNASSSNREGSSSGSTSLATAGGGGGSSGGGSGGGGGSSGGIVRERYND
NRNSRHNEVPRRGEGGGRYNEVQRHGEGGGRHSDGYRHGEGRHGDNHRHGESRHFADVGS
GNRNNGDSRSSNEGRNNXXXXRKGSQQPRQQDRWFCCPRAPKA
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaataaaggtggacctggtactaagagaggctttggttttggtggatttgcc
ataacacctggaaaaaaagaggagcctaagctctctcaacagtctcatagtgcttttgga
acagctggttcttctgctgcatttgcaaaatcaggacctcctcagctgccttctttctac
aaaattgggtcaaagcgagcaaattttgatgaagagaatgcgtactttgaggatgaagag
gaagattccagcaatgttgaattgccatacattcccgcagagaattcccccactcgccag
cagtttcattccaaatcagcagactctgacagcgatgatgatcctctggaggcattcatg
gctgaagtggaggatcaagctgctcgagacatgaagaggctcgaagataaagacaaagaa
aagaagaatgttaagggtattcgagatgacattgaagaggaagatgaccaagaagcttat
tttcgctacatggctgaaaatcccactgctggtgtggtccaagaagaggaagaggataac
ctggagtatgatagtgatgggaacccaattgcaccgtccaaaaaaatcattgatcctctc
ccacctattgatcattcagagattgaatatccaccgtttgagaaaaatttctatgatgag
catgaggagatcaccagtctcaccccgcagcaagtggtggagttacgtcataaacttaat
ctccgggtgtctggtgctgctcctccacggcctggcagtagttttgctcattttgggttt
gatgagcaacttatgcatcaaattaggaaatccgagtatacccagccgactcctatacaa
tgtcagggtgtaccagttgcactaagtggcagagatatgattgggatagctaagactgga
agtggaaaaacagcagccttcatctggccgatgttgattcacatcatggatcaaaaggag
cttgaaccaggggatggtcccattgccgtgattgtctgcccgaccagagagctttgccaa
cagatccattccgaatgcaagcgctttggtaaggcgtacaatctgcgctctgtagctgtg
tatggaggaggaagcatgtgggagcaagccaaagcgctccaggagggcgcagagatagtt
gtctgcacaccaggtcgtttgattgatcatgtgaaaaagaaagctacaaaccttcaaaga
gtcacttaccttgtgtttgatgaagctgacagaatgtttgatatgggttttgaataccag
gttagatcaatcgcaagccatgtacgtcctgacagacagaccctcttgttcagtgccacc
ttccgtaagaagattgagaaattggcccgagatattctgatcgacccaattcgagttgtg
cagggagacattggagaggcaaatgaagatgttacccaaattgtggagattttcccctct
ggccctagcaaatggaactggctgactcgacgcctcgtcgagttcacatcgtctgggagc
gttctcctgtttgtcaccaagaaggcaaatgcagaagagctggccaataacctcaagcag
gaggatcataatctggggctgcttcatggtgacatggaccagagtgagaggaataaagtc
atttcagaatttaagaaaaaggggatcccaatactggtagctactgatgtggcagctcgt
gggttagatatcccttccattaagactgtcatcaattatgatgtggctcgggacatagat
acacacacccacagaattggtcgtactggcagagcaggggagaagggagttgcctacact
ctgctgactcccaaagacagtaactttgctggtgatctcgtcagaaatctggaaggcgct
aatcaacatgtttccaaagagctgttggatctagcaatgcagaatccgtggttccggaaa
tcacgtttcaaaggaggaaaaggcaagaagctaaatattggtggtggtggcttaggatac
cgtgaacgtcctggtctgggatcagaaaattctgaccgtggaaacaacaacagtgtcatg
agtaactatgaggcatacaagccgtccactggggcaatgggagacagacttacagcaatg
aaagcagcttttcagtcccagtataagagccactttgttgctgcaagcttaaataatcaa
aagactggtagctctgctgctggtgctagtggctggaccagtgctgggagcttgaactca
gtaccgacgagttcagcacagcaaaatgctgcaaatcctgacagcccaattgcagctgcc
gcagcagcaaaaggtgttccaggtttcaccagcacggggaatttgagtagcgttcctacc
tttccaagtatgggagtacagggcttcaacaacaccaatgccagcagcagcaatcgagaa
ggcagcagcagcggcagcaccagccttgccactgctggcggtggcggtggcagcagtggt
ggcggcagcggtggtggtggtggcagcagcggcggcattgtcagagaacgatacaatgac
aaccggaacagtcgccacaacgaggtcccacgccgtggagagggtggtggtcgctacaat
gaagtgcagcgccatggagaaggaggcggtcgccacagtgacggttaccgccatggagaa
ggccgacatggtgacaaccatcgccacggtgaaagccggcacttcgctgatgtgggcagt
ggcaatcgcaataatggtgatagcaggagtagcaacgaaggtaggaacaacgnnnnnnnn
nnacggaagggaagccaacagccgagacaacaagacagatggttttgctgtcccagagcc
cccaaagcgtaa
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integrated database retrieval system
