Falco peregrinus (peregrine falcon): 101924142
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Entry
101924142 CDS
T02856
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA decapping 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
fpg
Falco peregrinus (peregrine falcon)
Pathway
fpg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101924142 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpg03019
]
101924142 (EDC4)
Messenger RNA biogenesis [BR:
fpg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101924142 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
101924142 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Beta-prop_EDC4L
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_Prp19
NBCH_WD40
WDR55
Motif
Other DBs
NCBI-GeneID:
101924142
NCBI-ProteinID:
XP_005229269
LinkDB
All DBs
Position
Un
AA seq
1403 aa
AA seq
DB search
MKFQFSKPVKISSEDFVETRGFDFAVLMCSVNENRRPSNSYNGDLNGLLVPDPIAAGDGP
SLAKPAHRSISLGALQEKQVICLSGDDSSTCIVISAKDVEIVASSDSSITSKARGSNKVK
IQPVARYDWEQKYYYGNLIAVSNSYLAYAIRAASNGSAMVRVLSISTAERTLLKGFTGGV
ADLAFAHLNSNQLACLDEAGNLFVWRLAMDKEKIQEEILVNIKRPENTPLNTSRRIIWCP
FIPDDNEESGEEGSQTLALLHEDRAEVWDLDLIRTNNSSWPVEVPSIKEGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSILPSLKVCLDLSAE
YLILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLP
AEEENDNLSVEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMSASMPSHG
SHEEFAFPDHMADLSTEGLGSEKGSVHGSQPDLRRIADLPVPADFLSLSNDAKPKLMTPD
AFMTPSTSLQQIAVSPGSSVSSLTAVTAMSSTSVADASMPRPSEDLTVSPKMQLDTSLTL
SSSSSSLQTSPRSHSVIIPGLPDKLTPKAPVPVTPGNPSLALELQEVEPLVVPQASPTRE
RSPDVISSASTAMSQDIPEIASETLQRSFAAAPSGLPAEVLEPSHHADSMASAASALHLL
SPRNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENASSDSVVSQPWPAAPDITRET
RNSMADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAK
ASTQRLPVKDWKAKASPRASPKLKRKGKKDDGDVNQSPRSSNNQVTPEFQDELMCILRSQ
QRELSDLRQNQMELLQRLTDHLDAIQSSLMGHVERVIDSQQEQEQRRLDRALTEGQQRNG
QLQEHLSQQLSQSLSTAVCNRLERTIREEMKKTVPQCISKSMDPVAGQLSNTIAAKLTTV
EGTLKESITKLVKSKNLTDTVVRATADTLQGPIQSAYKEAFQSVVLPAFEKSCQSMFQQI
NDTFKQGTQEYIQQLETHLKNRKVREQEARDPLLXXXXLITTFQSTTEQLASTVAASVHA
EVQHQLHIIVGNMQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSAH
LDFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVL
LSLIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQVEPH
NTLSKPARRLMIMLQGLVTPGMT
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcagttttcaaaaccagtgaaaatttcaagcgaggattttgttgagacacga
ggctttgacttcgctgtgctgatgtgttcggtgaatgagaaccggagaccgtcaaattcc
tataacggagacctgaatggactgctggtgcctgatcccattgcagctggagatggacct
tctttggctaagccggcgcatcgcagcatttctctgggagccctgcaggagaaacaagtc
atctgcctttcaggtgatgacagctccacttgcatagtgatatcagcaaaagatgtggag
atagtggccagcagtgattccagcatcaccagtaaggccagagggagtaacaaggtgaaa
atacagcctgttgctagatatgactgggagcagaaatattattatggcaatctgatagct
gtttcaaactcttacctggcttatgccattagagctgccagtaatggctccgctatggtg
cgggtgttgagcatcagcactgctgagcggaccttgctgaaaggattcacaggtggtgtg
gcagacctggcttttgctcatctcaactccaaccagctggcatgcctggatgaggctggc
aacctttttgtctggcgcctggccatggataaagaaaagatccaagaggagatcttggtt
aacatcaagcgacctgagaatacacccttgaacacctctcgacgaatcatctggtgccct
ttcattccggatgataatgaggagagtggtgaagagggaagtcagacgttggcattgttg
catgaggacagggcagaggtgtgggatttggaccttatccgaacgaacaacagctcctgg
ccggtggaggtgcctagcatcaaagaaggcttcatcgtagtgaaaggccacagcacgtgc
ctcagtgagggagcactttctccggatggaactgtgttggccacagcaagtcatgatggt
tttgtcaaattctggcagatctatattgaggggcaagatgagccaaggtgtcttcatgag
tggaaaccccatgatggtaggcctctttcctgcctgctgttttgtgacaaccataaaaaa
caagacccagaggttcccttctggagatttctcattacaggagcagatcagaacagagaa
ctgaagatgtggtgcactgtgtcttggacctgtctgcaaactgtccgcttttctcctgac
atcttcagctccatgagtattcttcccagcctgaaagtctgcctggatctctctgctgaa
tatctgatactgagcgatgtccagagaaaagttttgtatgtgatggagctgatgcagaac
caagaggagggcaaggcttacttcagctccatctcagagttcctcctcacccacccagtc
ctcagctttggcatccaggcagtgagccgctgtcggttaaggcacactgaagtgctccca
gcagaagaggaaaatgacaacttgagtgtggaaggtgctcagggagctggggctgttgaa
tcagcagcaggcgtgctgataaaactcttctgtgtgcacaccaaagccctacaggatgtg
cagattagattccagcctcttcatagccctgacatgagtgcctccatgccttcccatggc
tctcatgaggagtttgcctttccagaccacatggctgatctgagcacagaagggctggga
tctgaaaaaggatcggtgcatggctctcaaccagacctgcggcgcattgctgatctgcct
gtaccagcagacttcctttctctctcaaatgatgccaaacctaagctgatgactccagat
gcattcatgacaccaagtacatctcttcaacagatcgctgtatctccaggcagcagtgtt
agttccctgactgcagtcacagccatgagtagcacttctgtcgcagacgcctccatgccc
aggccatcagaagacttgaccgtgagccccaagatgcagctagacaccagcctcacgctg
agtagcagcagcagcagcctccaaactagtcctaggagccattcagttattatcccaggc
ctccccgacaagctaacaccaaaggcgcctgttccagtcacaccaggaaacccctcttta
gcactggaactgcaggaggtggagcccttggtggtcccccaggcgtctcccacccgtgag
cgctcgccagacgtcatttcctctgcttccacagctatgtcccaagatatcccagagatt
gcttccgagaccttgcaacgtagctttgcagcagctccgtctgggctccctgcagaggtg
ctggagcccagtcaccatgcagacagtatggcatctgctgcctcagccttgcatttgctg
tctccgaggaaccggcacaattcagagcacagccaccactctttggacatgcctccagtg
gaggtggacagactgaatgctccatcgttactggagactgctttaactcaggaaaatgca
tcttctgacagtgttgtgagtcagccatggccagcagctcctgacataaccagagaaact
aggaacagcatggcagacagcccaagggatgaagttgaagaaaagcacaagagctcttcc
tatcatcgacacagctaccacctgctgcagcatgacagccaggatgctagtgcagaacaa
agtgatcatgatgatgaagtcgcaagcttggcttctacgtcaggcggatttggtgccaaa
gcgtctacgcagaggctgcctgtgaaggactggaaagccaaggcatcaccccgggcttcc
ccaaaactaaagcggaagggcaagaaagatgacggggatgtgaaccagtcaccaagatca
tctaacaaccaggtgacaccagagttccaggacgagctgatgtgcatattgaggagccaa
cagcgggagctctctgacctgcgtcagaaccagatggagctgctgcagagactcacggat
caccttgatgctattcagagctcccttatgggccacgtggagagggtgattgactcccag
caggagcaggagcagagaagactagaccgagcactgacagaaggacagcagcgcaatggg
cagctccaggagcatctgtctcagcagctctctcagtccctttccactgctgtgtgcaac
cgcctggagaggaccattcgcgaggagatgaagaagaccgtaccccagtgcatttccaag
agcatggaccctgtcgctggccagctaagtaacactattgctgccaagctcacgactgtt
gaggggaccctgaaagaaagtatcaccaagctagtgaaatcaaagaaccttacagatacc
gtggtgagggcaacagccgataccctgcaggggccgatccagtcagcttacaaggaagcg
tttcagagcgttgtgttgccagccttcgagaagagctgccagtccatgtttcagcaaatc
aatgacacctttaagcagggcacacaggaatatatccagcagcttgagactcacttgaag
aacaggaaggtacgagagcaggaggcccgggacccgctgctgnnnnnnnnnnnnctcatc
accaccttccagagcaccacggagcagctggcttccactgtcgcagccagcgtccatgct
gaggtgcagcatcagctgcatattatcgtgggcaacatgcaggagtctattttggcccag
gtgcagagagtcattaaaggagaagtgagcctggctatgaaggagcagcaggcagctgtc
acctcaagcatcgtccaggcaatgcgctcagcagccgggactccgatcccctctgctcac
ttggatttccagtctcagcagactcacatccttcagctgctccagcagggacacctcaac
caagctttccagcaggctctaacagcagctgacctcaacttggttttgtacgtctgtgag
actgtggatactcagcaagtatttggccagcatccatgcccactgtcccagcctgtgctg
ctctctctcattcagcagctctcctcggatttgggtactcgtacagaactgaagttgaat
tacttggaggaagcagtgatgcacctggaccacagtgaccccatcacccgagaccacatg
gggtcggtcatgaaccaggtgcggcagaagctcttccagttcctccaggtggaaccccac
aacacgctgagcaagcctgcccgtcgtctcatgatcatgcttcagggcctggtcacccct
ggcatgacctag
DBGET
integrated database retrieval system