Francisella philomiragia subsp. philomiragia ATCC 25017: Fphi_0241
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Entry
Fphi_0241 CDS
T00652
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
fph
Francisella philomiragia subsp. philomiragia ATCC 25017
Brite
KEGG Orthology (KO) [BR:
fph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fph03032
]
Fphi_0241
03400 DNA repair and recombination proteins [BR:
fph03400
]
Fphi_0241
Enzymes [BR:
fph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Fphi_0241
DNA replication proteins [BR:
fph03032
]
Prokaryotic type
DNA Topoisomerases
Fphi_0241
DNA repair and recombination proteins [BR:
fph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Fphi_0241
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
GyrB_insert
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ABZ86457
LinkDB
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Position
complement(252765..255176)
Genome browser
AA seq
803 aa
AA seq
DB search
MSENKAYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNAIDEALAGHCDD
IKVIINKDGSVSVSDNGRGIPTDIHKEEGRSAAEVILTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEQLKLTIYRNGIEHYQEYVHGVPQFPLKEVGTTDKKGTVITFKPSKDTFSF
VDFDYDILMKRIRELSFLNSGVKIELIDRINNRSEIFKYDGGIIAFVKYLNNSKKPIHEN
VIAVNGIKDDIQVELALQWNDSYKESIFCFTNNIPQRDGGTHLSGLKAAVTRTMNTYIES
EGLNKKLKVTLTGEDTREGLAAVLSVKVPDPKFSSQTKDKLVSSDVKSAVESLVNEKLQE
FLLENPKEAKIVCEKILDSAKAREAARKARDMTRRKGALDIAGLPGKLADCQEKDPSLSE
IYLVEGDSAGGSAKQARDRKTQAILPLKGKILNVEKARFDKMLGSQEVATLIKALGCGIG
AEDYNPDKTRYHKIILMTDADVDGSHIRTLLLTFFYRQMPELVERGYLYIAQPPLYKVKK
GKQETYLKDEDALAVYLGNIGLEGAIIFLEGGNAISGQVLTNYYELYQKSEKVIKKYAKT
YPEKLLRVMAYGAKYVDESADIKQWWETIVDKCNHKALSYERFKLIETKDVDEDGQETIS
YGVNHYINGYDTDYIVKNSFFTTKDYEDLVTYGDVLSDISFKGAYVERGAKKEYVDDFES
AIDWLLKEARRGNDVQRYKGLGEMNPGQLWETTMDPDNRVLLQVSIKDAVEADALFTTLM
GDEVEPRRNFIESNALNVVNLDV
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaataaagcttatgattcgtcgagtattaaagtactcaaaggcttagatgca
gttagaaaaagaccaggaatgtacattggtgatacggatgatggtagtggtttgcatcat
atggtatttgaggttgtcgataatgctatcgatgaagctttggctggtcattgtgatgat
attaaagttatcataaataaagatggctcagtatctgtgtcagataatggacgtggtatt
ccaacagatattcataaagaagaaggtcgttcagctgctgaagtgattttgactgtactt
catgctggcggtaagtttgatgacaactcatataaggtttctggtggcttacatggtgtg
ggtgtctctgtagttaacgctttatcagaacagctaaaacttactatatatcgtaatggt
atagagcattaccaagagtatgttcatggtgttccacaatttccacttaaagaagtcgga
actaccgataaaaaaggtacagttatcactttcaagcctagtaaagatacattttctttt
gtcgattttgattatgatattctgatgaaaagaattcgtgaattatcttttttaaattca
ggtgtaaaaattgagcttatcgatagaatcaataatagatcagaaatattcaagtatgat
ggtggtattatagcctttgtgaaatatttgaataatagtaagaaaccaatccatgaaaat
gttattgctgtaaatggtatcaaagatgatattcaggttgagcttgcattgcagtggaat
gattcttacaaagagtctattttctgttttacaaacaatattcctcaacgcgatggtggt
actcacttatcaggtttaaaggcagctgttactcgtaccatgaatacatatatcgagtca
gaaggtttaaacaaaaagcttaaggttacactcacaggtgaggatactcgagagggcttg
gctgctgtattatctgtaaaagttccagatcctaaattctcttctcaaacaaaggataaa
ctagtatcgtcagatgttaaatctgctgttgaatcattagtaaatgagaagttacaagag
tttcttttagagaaccctaaagaggctaaaatagtatgtgagaagattttagactctgca
aaagctcgtgaagcagctcgtaaagctcgtgatatgactcgtcgtaaaggagctttggat
attgcaggtcttcctggtaagttagcagattgtcaagaaaaagatccttcattatctgaa
atctatctagtggagggagattctgcaggaggttcagctaaacaggctcgtgatcgtaag
acgcaagcaattctacctctaaaaggtaagattttgaatgtagagaaagctcgtttcgac
aaaatgcttggttctcaagaagttgctactcttatcaaagcactaggttgtggtattggt
gcagaagactataatcctgataaaactagatatcataaaattattttgatgacggatgct
gatgttgatggatctcacattagaactcttcttttaacattcttttatagacaaatgcct
gaacttgttgagagaggttatttatacattgcacaaccacctttatataaggttaaaaaa
ggtaagcaagaaacatacttaaaagatgaagatgctttagcagtatatcttgggaatatt
ggtttagagggcgctattattttccttgaaggtggtaatgctatctctggtcaagtttta
actaattattatgagctctatcagaagtcagaaaaagtaattaaaaagtatgcaaaaaca
tatcctgaaaaattacttagagtgatggcatatggtgctaagtatgtagatgaaagtgct
gatataaaacaatggtgggaaactattgttgataaatgtaatcacaaagcattatcttac
gaaagatttaagcttatagaaactaaagatgtagatgaggatggtcaagaaactatttct
tatggtgttaaccattatatcaatggttatgatactgactatattgttaaaaatagtttc
tttactactaaagattatgaagatcttgttacttatggtgatgtattatctgatatttct
ttcaaaggagcttatgtagaaaggggtgctaaaaaggaatatgttgatgactttgagtca
gcaattgattggttgcttaaagaagcaagacgtggtaatgatgtacagcgttacaaaggt
ctaggtgagatgaacccaggccagctttgggagacaactatggatcctgataatagagtg
ttgctccaggtatcaatcaaagacgctgtagaggcagatgctttatttactactcttatg
ggtgatgaagttgagcctcgtaggaattttattgagtctaacgcacttaatgttgttaat
ttggatgtttaa
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