Francisella philomiragia subsp. philomiragia ATCC 25017: Fphi_0563
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Entry
Fphi_0563 CDS
T00652
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fph
Francisella philomiragia subsp. philomiragia ATCC 25017
Pathway
fph03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fph00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Fphi_0563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fph03021
]
Fphi_0563
03400 DNA repair and recombination proteins [BR:
fph03400
]
Fphi_0563
Enzymes [BR:
fph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Fphi_0563
Transcription machinery [BR:
fph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Fphi_0563
DNA repair and recombination proteins [BR:
fph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Fphi_0563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
DUF4094
POLH-Rev1_HhH
Motif
Other DBs
NCBI-ProteinID:
ABZ86781
UniProt:
B0U0W5
LinkDB
All DBs
Position
complement(610424..611401)
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AA seq
325 aa
AA seq
DB search
MSNNNSNQEFVPNIQLKEELGAFGYKIQVSPVEKGMAHILGNSIRRFLLSSLSGASIIKV
NIDGVLHEYSTLEDVKEDVVEIVSNLKKVAIKLDKNVSKVELELSVTKSGVVVVTAGDFK
TTQGIEIINKDQPIATLTNEREFSLTATVSVGRNVGILSALPTELEKVGDIAVDSDFNPI
KRVAFEIFDNGTNETLEVFVKTNGTIEPLVAVTKALEYFCEQISVFVSLRVPSNGKTGDA
LLDSNIDPILLKPIDDLELTVRSSNCLRAENIKYLGDLVQYSESQLMKIPNLGKKSLNEI
KQILIDNNLSLGVQIDNFRELVEGK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaataataattcaaatcaggaatttgtacctaatatacagcttaaagaagagtta
ggggcttttggatataaaattcaagtttctcctgtagaaaaaggtatggctcatatcctt
ggtaactctattagaagatttttgttatcttcattatcaggtgcttctattattaaagtt
aatatagatggtgttcttcatgaatattcgactttagaagatgttaaagaggatgttgtt
gagattgtttctaatttaaagaaggttgcaataaaacttgataaaaatgtatcaaaagtg
gaattagaactatcagtaacaaaatctggcgttgtggttgtgactgctggtgatttcaaa
actactcaaggtattgaaataattaacaaggatcaacctattgctactctaactaatgag
agagagtttagtttaacagctactgttagcgtaggtagaaatgttggaattctttcagca
ttaccaactgagcttgaaaaagttggagatatagcggtagattctgattttaatccaata
aaaagagttgcttttgaaatctttgataatggcactaatgaaactctagaagtatttgtg
aaaacaaatggtactatcgagccactagtagctgttacaaaagctcttgagtatttctgt
gaacagatatctgtatttgtatctcttagagtacctagtaatggtaaaacaggtgatgca
ttgttagattctaatattgatcctatattgcttaaaccaattgatgatctagagttaacg
gttagatcatctaattgtttgagagctgaaaacatcaagtatcttggtgacttagtacag
tattcagaatcacaacttatgaagatacctaatttaggtaaaaaatctttaaatgagatc
aagcaaattttaatagacaataacttatctctaggtgttcagattgacaattttagagaa
ctagttgaaggaaaataa
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