Francisella philomiragia subsp. philomiragia ATCC 25017: Fphi_1023
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Entry
Fphi_1023 CDS
T00652
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fph
Francisella philomiragia subsp. philomiragia ATCC 25017
Pathway
fph03420
Nucleotide excision repair
fph03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Fphi_1023
03430 Mismatch repair
Fphi_1023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fph03400
]
Fphi_1023
Enzymes [BR:
fph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Fphi_1023
DNA repair and recombination proteins [BR:
fph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Fphi_1023
MMR (mismatch excision repair)
Other MMR factors
Fphi_1023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
DEAD
CarD_TRCF_RID
DUF4252
Motif
Other DBs
NCBI-ProteinID:
ABZ87247
UniProt:
B0TWY9
LinkDB
All DBs
Position
1107481..1109709
Genome browser
AA seq
742 aa
AA seq
DB search
MSNKDFLSGLNPQQKKATLLEDRNSLILAGAGSGKTKVLTSRIAYLCRDKGVSVENILAV
TFTNKAAKEIQHRVEKMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQDEQA
QLIKKVIKSLDLDDKKYPPKLLQNFINKQKDKAVRSNKLTKQYDINYTHIYTAYEERLLL
DNALDFADLLLYLYELFSLNQQLREYYQSLFRYILIDEFQDTNQVQYMWLKLLVTDNNYM
MAVGDDDQSIYGWRGAVVDNIHKYVADLNDVEIIKLEQNYRSTKNILKVANSVIKNNDNR
MSKELWSAAEDGEKVEVYCAVNERDEAKYIIDKIRQLHDGGVDYSDIAILYRSNYLSRVL
EESCIYTSIPYRIYGGFRFFDRAEVKDALAYLRLAVTSNDNLAFERIINTPTRGIGNKTL
DTIRNFSQINNVSYWQATIDIIQKEIVTKRTASLLLKFIEIINAISSQIKDLSLDKLLET
VINESGLLASYQEKDTEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFAVLE
AGEMQADENTDSVQLMTIHASKGLEFRYVFLVAAEEGVFPPSSIINAEEAYTSSESKKIQ
EKLAEERRLFYVAVTRAMKALTISYAQVRNIFGRSSFQVKSRFLMEIDSEHINEGKLTVG
SQNKPKLKQKSNFGVSPFDFLKSNDTKGNKFKKGDKVFHKVFGKGIFVKAQSQGSKEFYT
VDFGVDVGQKILLADIANLVKV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagactttctttcagggttaaatccccaacaaaaaaaagcgaccttgcta
gaggatcgtaattctttgatacttgctggagccggtagtggcaaaacaaaagttttaact
tctcgtatagcctatctttgtcgtgataaaggagtatctgttgaaaatattctggctgta
acattcacaaacaaagcagctaaagaaatccaacatcgagttgagaaaatgcttggtatt
tcaacttttggtatgtggataggtacttttcacggtattgctcatagattattacgtaag
catgctcatgagttgggcctagataagaactttaggattcttgatcaagatgagcaagct
caattaatcaaaaaagtaattaagagtttggatcttgatgataaaaaatatccaccaaaa
ttattgcaaaactttattaataaacaaaaagataaggctgttcgtagtaacaaattaaca
aagcagtatgatattaattatactcatatttatactgcttatgaagagaggttgctgtta
gataatgctttagattttgccgacttacttttgtatttatatgaattgttttctcttaac
caacagcttagagaatactatcagagtttattcaggtatattttgatagacgagtttcag
gatactaaccaagtccaatatatgtggttgaagttacttgttactgataataactacatg
atggctgttggtgatgatgatcagtcaatatatggttggcgtggagccgttgttgataat
attcacaaatatgtcgcagatctaaatgatgttgaaatcataaagttagagcaaaactat
cgttcaacgaagaatattcttaaagtagccaattctgtaatcaaaaataatgataataga
atgtcaaaagaactatggtctgctgctgaagatggcgaaaaagtagaagtatattgtgca
gttaatgagcgtgatgaagcgaaatatattatagataaaattcgccagttacatgatggt
ggagtcgattactctgatatagcaattttatatcgctcaaactatttgtcgcgtgtcctt
gaggagagttgtatttatacaagtataccttataggatttatggaggttttcgtttcttt
gatcgagctgaagttaaggatgccttagcatatttaagattagctgttacaagtaatgat
aacttagcatttgagagaattattaatactccaacacgaggaattggcaataaaacttta
gatacaattcgtaatttctcacagattaataatgtgtcatattggcaagccactatagat
attatccagaaagaaattgtgacaaaaagaactgcgtctcttctgttaaagtttatagaa
attataaatgctatttcatcacaaataaaagacttaagtctagataagcttcttgaaact
gtaatcaatgaaagtggtttgttggcatcatatcaagaaaaagatactgaaaaagatcgt
caaaaaattgataacttaaaagagttaataagtgcagctaaagattttgaaccgcagata
gagttacttgatgataatactgatatactacaagattttttgtcttttgcagtgctagaa
gctggtgagatgcaggctgatgaaaatacagatagtgttcagctaatgacaatacatgcg
tcaaaaggtttagaatttcgctatgttttcttagtagcagcagaagaaggagtatttcct
cctagctcgattattaatgctgaagaggcatatactagttcagaatctaaaaaaatccaa
gaaaagctagctgaagagagacgtttattttatgttgccgttacaagagctatgaaagct
ctaaccattagctatgctcaagtgcgtaatatctttggtagaagcagtttccaagtcaaa
tcacgctttctgatggagatagactctgaacatattaatgagggtaaactaactgtagga
tctcaaaataaaccaaagttaaagcaaaaatcaaattttggtgtatctccttttgacttt
cttaagtcaaatgatacaaaaggtaataagttcaaaaagggagataaggtgttccataaa
gtctttggtaaggggatttttgtcaaagcacaatctcaaggttcaaaagagttttatact
gtagactttggtgtagatgtcggtcagaagattttattggcggatattgctaatcttgtt
aaggtctaa
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