Francisella philomiragia subsp. philomiragia ATCC 25017: Fphi_1099
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Entry
Fphi_1099 CDS
T00652
Name
(GenBank) chaperonin GroEL (HSP60 family)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fph
Francisella philomiragia subsp. philomiragia ATCC 25017
Pathway
fph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Fphi_1099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fph03019
]
Fphi_1099
03110 Chaperones and folding catalysts [BR:
fph03110
]
Fphi_1099
03029 Mitochondrial biogenesis [BR:
fph03029
]
Fphi_1099
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fph04147
]
Fphi_1099
Enzymes [BR:
fph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Fphi_1099
Messenger RNA biogenesis [BR:
fph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Fphi_1099
Chaperones and folding catalysts [BR:
fph03110
]
Heat shock proteins
HSP60 / Chaperonin
Fphi_1099
Mitochondrial biogenesis [BR:
fph03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Fphi_1099
Exosome [BR:
fph04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Fphi_1099
Exosomal proteins of other body fluids (saliva and urine)
Fphi_1099
Exosomal proteins of breast cancer cells
Fphi_1099
Exosomal proteins of colorectal cancer cells
Fphi_1099
Exosomal proteins of bladder cancer cells
Fphi_1099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
Motif
Other DBs
NCBI-ProteinID:
ABZ87323
UniProt:
B0TX65
LinkDB
All DBs
Position
1188455..1190086
Genome browser
AA seq
543 aa
AA seq
DB search
MAAKQVLFSDEARAKMLDGVNTLANAVKVTLGPKGRNVVLDKAYGAPTITKDGVSVAKEI
ELEDKFENMGAQIVKEVASKTADVAGDGTTTATVLAQALLTEGLKAVAAGMNPMDLKRGI
DKAAAKLVEELKVLSKPCSDTKSIEQVGTISANSDSTVGKLIAEAMAKVGKEGVITVEEG
KGFEDELDVVEGMQFDRGYLSPYFATNQENMTTDLESPYILLVDKKISNIRELLPVLEGV
SKSGKALLIIAEDVESEALATLVVNNMRGVVKVCAVKAPGFGDRRKAMLEDIAILTGATV
ISEDLGMKLEEANMEHLGTASRVQVSKDDTTIIDGAGNKDAIVNRVNQLKANVAEATSDY
DKEKLQERLAKLSGGVAVIRVGAVTEAEMKEKKDRVDDALHATRAAVEEGIVAGGGVALI
RAQKALDGLVGDNDDQNHGIALLKKAIEAPLRQIVSNAGGESSVVVNEVKAKEGNYGYNA
ANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMVAEIKEDAPAMPMGGMGGMP
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaacaagttttattttcagatgaagctcgtgcaaaaatgctagatggtgtg
aatactctagctaatgctgtaaaagttactttaggtcctaaaggtcgtaatgttgtttta
gacaaagcttatggtgcaccaacaattactaaagatggtgtatctgttgctaaagagatc
gaactagaagataagtttgagaatatgggtgctcaaatagttaaagaagtagcatctaaa
actgctgatgtagcaggtgatggtactactacagctactgtattagctcaagcgctactt
acagaaggtctaaaagcagttgctgcgggtatgaaccctatggatctaaaaagaggtatt
gataaggctgctgctaaattagtagaagagctaaaagtactttctaagccttgttcagat
actaaatctatcgagcaggttggtacaatctctgctaactctgactctactgtaggtaag
cttatcgctgaagctatggcaaaagttggtaaagaaggtgtaatcactgtagaagaaggc
aaaggctttgaagatgagcttgatgtggttgaaggtatgcaatttgatagaggttattta
tctccatattttgcgacaaaccaagagaatatgactactgatctagagagcccatatata
ttactagttgataagaaaatctctaatatccgtgaattacttcctgtattagaaggtgtt
tctaagtctggtaaagctttactaatcatcgctgaagatgttgagagtgaagctttagct
actttagttgttaacaatatgcgtggtgtagtgaaggtatgtgctgtcaaagctcctggt
tttggtgatagaagaaaagcaatgcttgaagatatcgcaattttaacaggtgctacagtt
atatctgaagatctaggtatgaagctagaagaagctaatatggagcatttaggtacagct
agtagagtacaagtatctaaagatgacactactattattgatggtgctggtaacaaagat
gctattgttaatagagttaatcaattaaaagcgaatgtcgctgaagctacttctgattat
gataaagagaagctacaagaaagattagctaagttatctggaggtgttgctgtaattaga
gttggtgctgttacagaagctgagatgaaagagaaaaaagatcgtgtggatgatgctctt
catgcaactcgtgcagctgtagaagaaggtatcgttgctggtggtggtgttgctcttatc
agagctcaaaaagctcttgatggcttagttggtgataatgatgaccaaaatcacggtatc
gcattacttaaaaaagcaatcgaagcaccattaagacaaatcgtatcaaatgctggcggt
gagtcttctgtagttgttaacgaagtaaaagctaaagaaggtaactatggctataatgct
gctaatgatacttatggtgatatggttgagatgggtatcttagatcctactaaagttact
cgttcagctctacaacatgctgcatcaatcgcaggtcttatgatcactacagaagcgatg
gttgctgaaatcaaagaagatgctcctgctatgcctatgggtggcatgggtggtatgcca
ggcatgatgtaa
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