Francisella philomiragia subsp. philomiragia ATCC 25017: Fphi_1271
Help
Entry
Fphi_1271 CDS
T00652
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fph
Francisella philomiragia subsp. philomiragia ATCC 25017
Pathway
fph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Fphi_1271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fph03021
]
Fphi_1271
03019 Messenger RNA biogenesis [BR:
fph03019
]
Fphi_1271
Transcription machinery [BR:
fph03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Fphi_1271
Messenger RNA biogenesis [BR:
fph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Fphi_1271
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
AAA
ResIII
S1CSD-TOTE-2
AAA_22
DUF3086
Motif
Other DBs
NCBI-ProteinID:
ABZ87496
LinkDB
All DBs
Position
complement(1387914..1389176)
Genome browser
AA seq
420 aa
AA seq
DB search
MNLNELKYKSVNELMDIAQSLDLESLRARKQELIFSILKYHADKGEDIYGEGILEVLQDG
YGFLRSSDSSYFASPDDIYVSPAFIRKLNLRTGDSIVGKIRPPRDNEKYFAVKHIDSVNF
DSPELARKKILFENLTPEYAKERLTMEIGNGSNEDITARVIDLAAPFGKGQRGLIVAPPK
TGKTIMMQNIATSIAKNHPECNLIMLLIDERPEEVTEMQRSVRGEVVASTFDEPAARHVQ
LAEIVIEKAKRLVEHKQDVVILLDSITRLARAYNTVSPASGRVLSGGVEANALQKPKRFF
GAARNTAEGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELHLDRKIAERRVFPAISFD
RSGTRREELLTTPEELQKLWVLRKILGGMEDVQAMEFLTEKMKGSLTNEEFFETMKRGAI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaatgaattaaagtataaatctgttaatgagctaatggatatagctcaaagt
ctagatcttgaatcacttcgtgcaagaaaacaagaacttatcttctcaattcttaaatac
catgccgataagggtgaagatatatatggcgaaggtatcttagaggttctacaagatggc
tatggcttcttgagatcttctgatagctcatattttgcatctccagatgatatctatgtt
tcacctgcttttatcagaaagctaaatctaagaactggtgatagtattgttggcaagatt
cgtccacctcgtgataatgaaaaatactttgcagtaaagcatattgacagtgttaacttt
gattcaccagaattagctaggaaaaaaatattatttgaaaacttaactcctgagtatgct
aaagaaaggctaactatggaaatagggaatggttcaaatgaagatattacggcaagagtc
atcgacttagctgctccatttggtaaaggtcagcgtggtctaattgttgcgcctccaaaa
actggtaaaacaattatgatgcaaaatatcgcaacatcaattgctaagaaccatccagaa
tgtaatctaatcatgctactgatcgatgagcgtcctgaggaagttacagaaatgcaacgc
tcagtgcgtggtgaagtagtagcatctactttcgatgaacctgcagctcgtcatgtccag
ttagctgaaatcgtaatcgaaaaagcaaaaagactggttgaacacaaacaagatgtagta
attctacttgactcaatcacaagacttgcacgtgcttataacactgtatcaccagcttct
gggcgtgtactatctggtggtgtagaggcgaatgctctgcaaaagcctaagagattcttt
ggtgctgcgcgtaatactgctgaaggtggtagcttgacaatcattgcaacagctcttgta
gagactggctctaagatggatgaggttatctttgaggaatttaaaggtactggtaacatg
gaacttcatcttgatcgtaagattgcagagcgtcgcgtattccctgctattagttttgat
agatctggtacgcgtagagaagagcttcttacaactcctgaagaactacaaaaactttgg
gtactacgtaagattcttggtggtatggaagatgttcaagctatggaattcctaacagaa
aaaatgaaaggttcattaactaatgaagagttcttcgagactatgaaaagaggtgctatt
taa
DBGET
integrated database retrieval system
