Francisella philomiragia subsp. philomiragia ATCC 25017: Fphi_1276
Help
Entry
Fphi_1276 CDS
T00652
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit/40 kD subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fph
Francisella philomiragia subsp. philomiragia ATCC 25017
Pathway
fph03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fph00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Fphi_1276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fph03021
]
Fphi_1276
03400 DNA repair and recombination proteins [BR:
fph03400
]
Fphi_1276
Enzymes [BR:
fph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Fphi_1276
Transcription machinery [BR:
fph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Fphi_1276
DNA repair and recombination proteins [BR:
fph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Fphi_1276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_A_bac
RNA_pol_L_2
DUF555
Motif
Other DBs
NCBI-ProteinID:
ABZ87501
UniProt:
B0TXP3
LinkDB
All DBs
Position
1394451..1395407
Genome browser
AA seq
318 aa
AA seq
DB search
MALENLLHPTNIKIDEYAKNATKFSFEALERGVGYTLGYALKQTMLYSIHGACVTSVKIN
DGKVTSLEDVIPCDETVADIILNVKSLPVTLAEGVDTGVITFELSGSEEEVFSEEAKLSE
GLAITEEVFICSYNGGKKLKIEAKVEKGIGYRQAQENFKNEEFLLDAAFSPVSFCDYEIK
DARVGRRTDLDKLELNIKTNGNVSCEEALRIAATKIQNQLRNIVDVEEINKGIFVEDPTK
DINPLLLKHVEELNLTARSSNCLKAVNIRLIGELVQKTENELLKAPNFGKKSLTEIKDKL
SELGLSLGTMIDNWPEDL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggaaaatttactacatcctactaatattaaaattgatgaatatgcgaaaaat
gctactaagttttcttttgaagctctagagagaggtgttggctatacacttggttacgca
cttaagcaaactatgctttattctatacatggtgcatgtgtcactagtgttaagattaat
gatggaaaagttacttcattggaagatgtgattccgtgtgatgagactgttgctgatatt
atcttaaatgtcaaatcactgcctgtgactttagcagaaggtgttgatacaggggtaatt
acttttgagctatctggttcagaagaagaagtcttttcagaagaagctaagttatccgaa
ggtttagcaattactgaagaagtttttatctgtagctacaatggtggcaaaaaacttaag
atcgaagctaaagtagaaaagggtattggctacagacaagcacaagagaacttcaaaaat
gaagaatttcttttagatgcggcattttctccagtatctttctgtgattatgagatcaaa
gatgctcgtgtaggtagacgtacagatttagataagcttgagcttaacattaaaacaaat
ggtaatgtcagctgtgaagaagctctaagaatagcagctacaaagatacaaaatcagctg
agaaatattgttgatgttgaagagataaataaagggatttttgtagaagatcctactaaa
gatataaatcctcttttacttaagcatgttgaagaactaaatcttactgcaagatcttca
aactgtctaaaagctgttaatattagattgattggtgaacttgtacaaaaaactgagaat
gagcttcttaaagcgccaaactttggtaagaagtcattgacagaaattaaagataaatta
tctgaacttggtttatctttaggaacaatgattgataattggcctgaagatctatag
DBGET
integrated database retrieval system
