Francisella philomiragia subsp. philomiragia ATCC 25017: Fphi_1331
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Entry
Fphi_1331 CDS
T00652
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V) beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
fph
Francisella philomiragia subsp. philomiragia ATCC 25017
Pathway
fph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Fphi_1331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fph03400
]
Fphi_1331
Enzymes [BR:
fph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Fphi_1331
DNA repair and recombination proteins [BR:
fph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Fphi_1331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ABZ87556
UniProt:
B0TXZ5
LinkDB
All DBs
Position
1451173..1454730
Genome browser
AA seq
1185 aa
AA seq
DB search
MTNLDANTITLQGRHIIEASAGTGKTFNITTLYIRLLLEKKLLPKDILVMTFTKDATQEI
IGRVEAKIRDVLADHKSGKEVLSDEDYKHIKRALLEVDEAAIFTIHGFCKKVLSEQAFAS
GIEMDVSMEVDTSDILQKVVEDFFRKHINKNKTNFEYLQAYKLHTPDMFLDKLRNVVRSS
YELLTKQAISLDEFKILKKQQLELFLNNHDIVDDFLSKLGKGEPQGKRVDEYHRVLEWLR
LYDEDPFPDNISIITNGNKIKGARVKPIFTGIKELRDLQEEIKKANATQFIKQACLQIRQ
DFSKAKEQKGVLDFDDLITKLCQSVKQSPDLVKTLQHQYPVALIDEFQDTDAEQYEILDT
IYPQSNKLLHSPLERGADRRGVVSVTDSPSSQRGIDDLLLLMIGDPKQAIYGFRGGDIFT
YLKAKDSCSNDNQWSMDTNWRSTSEMIKAYNRLFYKQDYLSEEEGQIGANIFSDGIGYQL
VKASPKANEKAKDFDDNLKPINYFYYQVAEDDNKSDIDNNLSAWTANEIVRLLNSKKVVE
SDIAILVENGKQAKVIQKALQAKKLSSVYLSQRDNVYHSQEATEILALMEGINDLENKSM
LKRALSTSLLGGRADKFISYIDENDVSAWDEEIEKAKSLRQQWHKYGFMAFIMQVIHQNF
TQRSDSKERVITNILHLAELIKVAENKYKHPNQLIKWYRQQLNSTATSEGELRLESDDNL
IKIITIHGSKGLEYSVVFIPFASYVSSKKFQVGDFSKYYDKYLKQTVYKIGKDDSIKPQI
ENEVIEELMRLFYVAVTRAEHRCYIGVAKYSNSEKSPLARFLDYQKDDDWLEKIQIITNN
PVNQSSLIDVATSHCNESENLITNDQFDHDTLQNLKANDINKLANDNWEMLSFSKISKSK
AQNTALEKEPDESEDDSAQKSQQELEFRFTAPKGADIGNILHNVLEHTDFSLGKIDDNLL
QEQMDRYKVVAAEDFDKLKVWLEECLVASIPSIETADFSSNDIQYGLFDIKDKGFCLKDI
SNTKTLKEAEFYFPITNEKLYKKNIIKILAEYRNQTIDYDEFASQKIFGMLHGFIDLIFE
YDGKFYVADYKSNYLGSTLEDYNQAAMSEKNQSSFYDLQYLIYSVALDKYLRQNIESYNY
EKHFGGVYYFYLRGMKDGYGVYRARPTLEIINKIANLFNGDDYHV
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgactaatctagatgcaaacacaataaccctacaaggtcgccatattatcgaggctagt
gctggtactggtaagacttttaatattactactttgtatatcaggttattacttgaaaaa
aagctattacccaaagatatccttgtaatgacctttaccaaagatgctacccaagagatt
atcggtagagtggaagctaagattagagatgtgttagcagatcataaaagtggtaaagaa
gttttatccgatgaagactataaacatatcaaaagagccttattagaagttgatgaggca
gctatttttactatccatgggttttgtaaaaaagtattaagtgagcaggcatttgctagt
ggtatcgagatggatgtctctatggaggtcgatacttcagatattttgcaaaaagtagta
gaggatttttttagaaaacatatcaataaaaacaaaacaaactttgaatatttgcaagca
tataagctacatactccagatatgtttttggataagctaaggaacgttgttaggtctagt
tatgaactattaacaaagcaagctataagcttagatgaatttaaaatacttaaaaagcaa
cagctggaattatttttaaataatcatgatatcgtagatgactttttatctaaattagga
aaaggcgagccgcagggcaagagagttgatgaataccatagagttttagaatggttgaga
ttatatgatgaagatccatttccagataatatatctataatcacaaatggtaataagatt
aaaggagctagggtaaagcctatatttactggcattaaagaattaagagacttacaggaa
gaaataaagaaagcaaatgcaacccaatttatcaaacaagcctgcctgcaaatccgccaa
gatttttcaaaagccaaagagcaaaaaggtgttttagactttgatgatttgattactaaa
ctttgtcaaagtgttaaacagtcaccagatttagtcaagactttgcaacatcaatatcca
gttgctcttattgatgagtttcaagatactgatgctgagcagtatgagattttggatact
atttatcctcaaagtaataagctactccattcccctcttgagaggggtgccgataggcgg
ggtgtggtgtctgtgactgattccccttcgtcccaaaggggaatagatgatttgttattg
ctaatgataggcgatccaaagcaagcaatttatggttttagaggaggagatatcttcaca
tatctaaaggctaaagatagttgctctaatgacaatcagtggagcatggatactaactgg
cgttcaactagtgagatgataaaggcttacaatagacttttttataaacaagactatttg
tcagaagaagagggtcaaattggagctaatatctttagtgatggtattggctatcagctt
gttaaagcatcaccaaaggcaaatgagaaagcaaaagactttgatgataaccttaagcca
ataaattatttctattatcaagtggcagaagatgataacaaaagtgatattgataataat
ttatcagcatggactgctaatgagattgtcaggctattaaattctaaaaaagttgtagaa
agtgatatcgcaattttggtagagaatggtaagcaagcaaaggttattcaaaaagctcta
caagctaagaaactaagctcggtatatctaagtcagcgcgataatgtctatcatagccaa
gaggctacagagatattagctcttatggaaggtataaacgatcttgaaaataaatctatg
ttaaaaagagcgttatcaactagtttacttggtggcagagctgataaatttattagttat
attgatgaaaatgatgtctcagcatgggatgaagagatagaaaaagcaaaatctctaaga
caacaatggcataaatatggttttatggcatttattatgcaagttatacatcagaatttt
actcaaagatcggattcaaaagaacgtgttatcacaaatattctccatttagctgagctt
ataaaagtagctgagaataaatataaacacccaaatcagctaatcaaatggtatcgccaa
cagctaaatagtacagctacaagtgagggcgaacttcgattagagagtgatgataatctg
attaagataattacaattcacggttcaaaagggcttgagtactcagttgtatttatacca
tttgcaagttatgtaagctcaaagaaatttcaagttggtgatttctctaaatactatgat
aaataccttaaacagacagtctataaaattggtaaagatgacagtataaaaccacaaata
gaaaatgaagttatagaagaattaatgcgcctgttttatgtggctgttacacgtgcagag
catagatgttatattggagttgcaaaatatagtaatagcgaaaaatcaccattagcaaga
ttcttagattatcaaaaagatgatgactggttagagaaaatccaaataatcacgaataat
cccgttaatcaaagttcgcttatagatgtagctacaagtcattgtaatgaaagtgagaat
ttaattacaaatgaccaatttgaccatgatactttacaaaacctcaaagcgaatgatatt
aataagttagcaaatgataattgggagatgctgtctttctcaaaaatatccaagtcaaaa
gctcaaaatactgcattagaaaaagaacctgatgagtctgaagatgatagtgctcaaaaa
tctcagcaggaattagagtttagatttacagctcccaaaggagcagatatcggtaatatt
ttgcataatgttttagagcatacggattttagcctaggcaagatagatgataatctttta
caagagcaaatggatagatataaagtagttgctgcagaagattttgataagcttaaagta
tggttagaagagtgtttagtcgcgtctataccttctatagaaactgcagattttagttct
aatgatattcaatacggtttgtttgatatcaaggataaaggcttttgcttaaaagacatc
tctaatacaaaaaccttaaaagaagcagagttttattttcctataacaaatgaaaaacta
tataagaaaaatattatcaaaattttagcagaatatcgtaatcaaactattgattatgat
gaatttgcaagtcaaaagatttttggtatgcttcatggttttattgatttgatttttgaa
tatgatggtaaattttatgtggcagattataagtcaaattatcttgggagtactctagaa
gattataatcaagctgctatgagtgagaaaaatcaaagtagcttttatgatttgcagtat
ctaatatatagcgttgccttggataagtacctgcgacaaaacattgaaagttataattat
gaaaagcattttggtggagtatattatttctatcttagaggtatgaaagatggttatggg
gtttatcgagcgagaccaactttagagattattaacaaaattgctaatctatttaatgga
gatgactatcatgtataa
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