Francisella philomiragia subsp. philomiragia ATCC 25017: Fphi_1851
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Entry
Fphi_1851 CDS
T00652
Name
(GenBank) DEAD-box subfamily ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fph
Francisella philomiragia subsp. philomiragia ATCC 25017
Pathway
fph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Fphi_1851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fph03019
]
Fphi_1851
03009 Ribosome biogenesis [BR:
fph03009
]
Fphi_1851
Enzymes [BR:
fph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Fphi_1851
Messenger RNA biogenesis [BR:
fph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Fphi_1851
Ribosome biogenesis [BR:
fph03009
]
Prokaryotic type
rRNA helicases
Fphi_1851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
Utp25_C
Cas3-like_C_2
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABZ88079
UniProt:
B0U160
LinkDB
All DBs
Position
complement(1981870..1983615)
Genome browser
AA seq
581 aa
AA seq
DB search
MNSETKKDFSQLGLNQDIIDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAA
FALPLINNMDLESRDRAPQVLVLAPTRELAIQVAEQFQAFAKNIPNLDVACIYGGQEYGS
QIRALKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVRYVLSHV
SDECQRLLFSATIPTDIADIIQEYLRNPCKIQVKAKTKTANTVTQKFIVIKGFRKIDALD
RLLEVEETDGVIIFVKTKTSTIEVADNLKALGYRVAAINGDMQQSQREYIVDQFRSAKSD
VLVATDVVARGIDLERISHVINYDMPNDSDTYVHRIGRTGRAGREGISISLVPLKEMRFL
RTLERFTGSPMQEVFMPSAKDLAQSRIDHFKTRIASALDKNKSLDNYKEIITSIRDELEL
DSDELLAVLTLLAQGKKSFFPREIQARDDRPQRDRNLRGNSRDGGRNDRFERRGDRSDRN
SRFDRSDKFDRSDRSDRKPRRAVNIDLTTYKLEVGRDNDVQPRNIVGAIANEGNIDSKHI
CNISIQKDHTLVDLPANLSPKVISHLRNVWVAGKKLNLTAQ
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgaaactaaaaaagattttagtcagcttgggctgaatcaagatattatagat
actgttataaaattaggatacgaaaatccaacaccaattcaacagtatgctattccatat
atcttatcgggtagagatgtgcttggtcaagcacagacgggtacgggtaaaacagcagct
tttgcattacctttaataaataatatggacttagaatctagagatagagctccacaagtt
ttggtattagctccaacaagagagttagctatccaggtagcagagcaatttcaagctttt
gctaagaatataccaaacctagatgttgcgtgtatctatggtggccaagagtatggttct
caaataagagcacttaagcaaggagtaaaagttgtagttggtactactggtcgtgtgatg
gatcacatcgaaaaagggacattacagcttgataatctaagagcattagtattagatgaa
gctgatgagatgcttagaatgggctttattgatgatgttagatatgttctaagtcatgta
tcagatgaatgccaaagattgcttttttcagcgactattcctactgatatagcagatatt
atccaagaatatctaagaaatccttgtaagatacaagtaaaagcaaaaacaaaaactgca
aatactgtgacacaaaaattcatagtaataaaaggctttagaaagatagatgcattagat
agattgcttgaagttgaagaaaccgatggcgtcattatctttgttaaaactaagacaagc
actattgaagtagctgataatctaaaagctcttggctatagagtagcagctattaatgga
gatatgcaacaatctcaacgtgaatatatagttgatcaatttagaagcgctaaatctgac
gttttagtagctacagatgttgttgccagaggtatagatcttgagcgtattagtcatgta
attaactatgatatgcctaatgattctgatacgtatgtacatagaattggtcgtacaggt
agggctggacgtgaaggtatttcaatttctctagttccattaaaggaaatgagattttta
cgtactttagagagatttacaggctctccaatgcaagaagtgtttatgccaagtgcaaaa
gacttagcacaaagtagaatagatcatttcaagactcgaatagcttcagcattagataaa
aataaatctttggataattataaagaaattattacaagtatacgtgatgagctagagtta
gactctgatgagcttttggctgtacttacattattagctcaaggtaagaaatcattcttc
ccgagagaaatccaagctagagatgatagacctcaaagagatagaaatttaagaggtaac
tctagagatggtggcagaaatgataggtttgagcgtagaggcgatcgtagtgatagaaat
agtcgttttgatagatctgataaatttgacagatcagacaggtctgatagaaagcctcgt
agagctgtaaatattgatttgactacatataaacttgaagttggtcgtgataatgatgtt
cagccaagaaatatagtaggtgctatagctaatgaaggaaatattgatagcaagcatatt
tgtaatatctctatccaaaaagatcatacattagtagatttgccagcaaatttatctcca
aaagttataagtcaccttagaaatgtttgggttgctggcaaaaaattaaatcttacagct
caataa
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