Fluviibacter phosphoraccumulans: SHINM1_000120
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Entry
SHINM1_000120 CDS
T07031
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fpho
Fluviibacter phosphoraccumulans
Pathway
fpho03030
DNA replication
fpho03430
Mismatch repair
fpho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHINM1_000120
03430 Mismatch repair
SHINM1_000120
03440 Homologous recombination
SHINM1_000120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpho03032
]
SHINM1_000120
03400 DNA repair and recombination proteins [BR:
fpho03400
]
SHINM1_000120
Enzymes [BR:
fpho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SHINM1_000120
DNA replication proteins [BR:
fpho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SHINM1_000120
DNA repair and recombination proteins [BR:
fpho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SHINM1_000120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
GIY-YIG
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BCA64410
LinkDB
All DBs
Position
complement(11257..12615)
Genome browser
AA seq
452 aa
AA seq
DB search
MQPLAFVDLETTGATASQDRITEIGIILVDDSGVQEWSSLVNPETRISGFIESLTGISNE
MVSDAPRFCDLASRVYKMLEGRIFVAHNARFDYAFLKQSFLREGIDFSAKTLCTVKLSRR
LYPGHPKHNLDTLIERHGLQVSGRHRALADAQLIHQFWNKVQATIPQEAIQSAVKALLGR
PSTPTHIDLTMIDGLPESPGVYLFYGESDLPLYVGKSVNIRQRVMSHFTADVTSAKEMSL
SQQVRRIEYIRTGGEIGALLKEAALVKKLQPTHNRQLRRNNELCSIQLKEATEGLQVHVA
YANDLDFSTTSNLYGLFKSKREALKALTEIAEEHSLCKAIIGLEKVKPGSPCFGRQLKKC
RGACIGDEIRLAHDTRLLSGLGKLKLKTWPFDGPAYLKEGEEMLLIENWAYLGSARSEEE
IWQLLDGHAAQFDKDTYKILSRLEGKLRQIAN
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccacttgcttttgtcgacctagagactaccggtgctacggcgtcacaggatcgc
atcaccgaaatcggcatcattctggttgatgattcaggcgttcaagagtggagctcactg
gtcaacccggaaacacgcatctcggggtttatagaaagcctgaccggcatcagtaatgag
atggtttcagatgccccccgcttttgtgatttggccagtcgggtttacaagatgttggaa
ggccggatttttgtcgcccacaacgctcgattcgactatgccttcctgaaacaatccttc
ctacgcgaagggattgatttcagcgccaagacgctatgtactgtgaagctctcgcgacgc
ctctaccccgggcaccccaagcacaatctggataccctgatcgaacgccacggccttcaa
gtttcaggacgccaccgcgcattggcagacgcccagctgattcatcagttctggaacaag
gtccaagccacgatcccacaggaagccattcagtcagccgtcaaagccttgctgggtcga
ccgagtactccgacgcacattgatctgacgatgatcgatggcttacccgaatcgccgggc
gtttatctcttttacggtgaaagcgacctgcccttatatgtggggaagtcggtgaatata
cgtcaacgggtcatgtctcatttcacagccgatgtgacatcagccaaggaaatgagtctg
tcacagcaggttcgccggattgagtacatcaggacgggtggcgagattggggcattactc
aaagaggcggcactggttaagaaactgcaaccgacgcataaccgccagttacgacgcaat
aacgagctgtgctcaatccagctcaaagaagcaacagagggcttacaggtccatgttgcc
tacgccaacgacctggatttttcgacaacatccaatctttatggattgttcaagagtaag
cgcgaagccttaaaggcactcaccgagatcgcggaagaacacagcctatgtaaagccatc
atcgggctagaaaaggtgaagccaggatcaccctgctttggccgtcagttaaaaaagtgt
cgcggggcgtgtatcggtgatgagatacggctggctcacgacacgcggctgctgtctggt
ttgggcaaactcaaactaaaaacctggcccttcgatggccctgcctatctaaaagaaggc
gaagaaatgctgttgatcgagaactgggcttatcttggtagtgcccgcagcgaagaagag
atttggcaactgcttgacggccacgcggcacaatttgataaagatacctataaaattctg
agcagactcgagggaaagcttcgccagattgctaactag
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