Fluviibacter phosphoraccumulans: SHINM1_000320
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Entry
SHINM1_000320 CDS
T07031
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
fpho
Fluviibacter phosphoraccumulans
Brite
KEGG Orthology (KO) [BR:
fpho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpho03021
]
SHINM1_000320 (rpoH)
Transcription machinery [BR:
fpho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SHINM1_000320 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
BCA64430
LinkDB
All DBs
Position
complement(32341..33234)
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AA seq
297 aa
AA seq
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MTSTAMTLSHASNPKTNALTAMPSPVGNLDAYIRAVQQYPMLTEQEEQNLARRLRDEDDL
DAARQLIVSHLRLVVSTARQYLGYGLPHADLIQEGNIGLMKAVKRFDPERGVRLVSFAMH
WIKAEIHEYVLKNWRLVKVATTKAQRKLFFNLRSMKGNASHLDQAATESIATQLNVSEAD
VREMNMRLSGRDIALDPGPDVSDDDSYAPIDYLADDTMEPTAILEGRDRDNLQSTGLQHA
LGQLDDRSRHIVQSRWLADDSGATLQDLADEYGISAERVRQIEAKALKSLRSYLVPA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgactgctatgaccctaagtcacgccagcaaccctaaaactaacgccttgacc
gcgatgccatcgccggtgggcaatctggacgcctacatccgtgccgttcagcaatatccc
atgctcaccgaacaggaagagcagaatttggcgcgccgtctgcgcgacgaagatgacctg
gatgcagcccggcaattgatcgtgtcccatctccgcctggtggtatctaccgcgcgtcag
tatctgggctacggtctgccgcacgccgacttgatccaggaaggcaatatcggcctgatg
aaggcggtgaaacgctttgacccagaacgcggtgtgcgtctggtctcctttgccatgcat
tggatcaaggccgagattcatgaatatgtgctgaaaaactggcgcctggtcaaagttgct
acgaccaaagcgcaacgcaagctgttcttcaatctgcgcagtatgaagggcaatgccagc
catctggatcaagccgccactgaatccattgctacccagctgaacgtgtcagaagccgat
gtgcgcgagatgaatatgcgcctgtctggccgtgacattgcactggatccgggccccgat
gtctcagatgatgatagctacgcccccatcgactatctggctgatgacacgatggaacct
acagcgattctggaaggccgcgaccgcgataacctgcaatcgactggcctacagcatgcg
ctgggacagctggatgaccggagtcgtcacatcgtgcaatcgcgctggttagccgatgat
agcggtgcgaccctgcaggatctggctgatgaatatggtatttcggccgaacgcgtgcgc
cagattgaagccaaggcgctgaagtcactccggtcgtatctggtacccgcctaa
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