Fluviibacter phosphoraccumulans: SHINM1_005130
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Entry
SHINM1_005130 CDS
T07031
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
fpho
Fluviibacter phosphoraccumulans
Pathway
fpho00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fpho00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SHINM1_005130 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fpho01007
]
SHINM1_005130 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpho03016
]
SHINM1_005130 (lysS)
Enzymes [BR:
fpho01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SHINM1_005130 (lysS)
Amino acid related enzymes [BR:
fpho01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SHINM1_005130 (lysS)
Transfer RNA biogenesis [BR:
fpho03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SHINM1_005130 (lysS)
Prokaryotic type
Other AARSs
SHINM1_005130 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BCA64911
LinkDB
All DBs
Position
complement(529509..531023)
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AA seq
504 aa
AA seq
DB search
MTEQNNGTIAAVHDENQLVTERREKLRAWRETGAAYPNDFQRDNLTAKLVEHFDPKTPEE
LEAMPISVSVAGRIMLKRVMGKASFLTIQDMSGRIQLHVTRDKVGEDVYDAFKKWDLGDL
VGCTGTLFKTKTDELTVKVETIRLLSKCLRPLPEKFHGLTDIEQRYRQRYLDLIMNQESR
ATFVARSKLVQSIRAYMVHDGFMEVETPMMHPIPGGASAKPFNTHHNALDMPLYLRIAPE
LYLKRLVVGGFEKVFEINRNFRNEGLSPRHNPEFTMMEFYEAYADYRSMMNFTEGVIRHA
AREALGKEVFTYQGRELDLSKPFHRLTIVQAVMKHCPQYTEAQLNDEVWLREELIKRKVD
LPKIIGLGGLQLMFFEETAEAQLWEPTFIVDYPAEVSPLARRSDKNPEIAERFELFIVGR
EIANGFSELNDPEDQAERFLAQVAAKEAGDEEAMYYDADYIHALEFGLPPTGGCGIGIDR
LIMLVTDSPAIRDVILFPQMRNLD
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcagaataacggcaccatcgctgcagtacacgacgagaaccagctggtgaca
gagcgccgtgagaagctgcgcgcctggcgcgaaacgggtgcggcctacccgaatgatttt
cagcgtgacaatctgaccgccaagctggtcgagcattttgacccgaagacgccggaagaa
ctagaagccatgcccatctcggtgagcgtggctggccgcatcatgctcaaacgcgtgatg
ggtaaagcatcgttcctgaccattcaggatatgtcaggccgcatccagcttcacgtcacc
cgcgacaaagtgggcgaagatgtttacgacgccttcaagaaatgggatctgggtgatcta
gtaggctgcacgggcacattgttcaaaacgaagaccgacgaattgaccgtcaaggttgaa
actatccgtctgctgagcaagtgtctgcgaccgctcccagaaaaattccatggactgact
gatatcgagcaacgttatcgtcagcgttacttggatctgatcatgaaccaggaatcacgc
gctacctttgtggcccgtagcaaactggtgcagtcgatccgtgcctatatggtgcacgat
ggctttatggaagtggaaacgccgatgatgcacccgattccgggtggcgcatcggccaag
cctttcaacacacaccacaacgcactggatatgccactttatctgcgcattgcgccggag
ctgtacctgaagcgtctggtggtgggcggtttcgagaaggttttcgaaatcaaccgcaac
ttccgcaacgaaggtctctcgccacgtcacaacccggaattcacgatgatggaattctac
gaggcctacgcagactacaggagcatgatgaactttacggaaggcgtaatccgtcatgct
gcccgtgaagcgctgggtaaagaagtatttacctaccagggccgtgaactggatctctct
aagcccttccaccgtctgaccattgtgcaggccgtgatgaaacattgcccgcagtacact
gaagctcaacttaatgatgaagtctggctgcgcgaagagttgatcaagcgcaaggtggat
ctgcctaagattattggtctgggtggtctgcagctcatgttcttcgaagaaacggctgaa
gcacaactgtgggaacctacgttcattgtcgattacccggccgaagtgtcgccactggcc
cgccgcagcgacaagaacccggagatcgccgagcgcttcgagctgtttattgtgggtcgt
gaaattgccaatggcttctcggaactcaatgacccggaagatcaagctgaacgcttcctg
gctcaagttgccgctaaagaagccggtgatgaagaagccatgtattacgatgccgattac
atccacgctttggaattcggtctgcccccaaccggcggctgcggtatcggcattgatcga
ctgatcatgctggtgactgactcacccgccattcgtgatgtgattctgttcccgcagatg
agaaatctcgactaa
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