Fluviibacter phosphoraccumulans: SHINM1_009000
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Entry
SHINM1_009000 CDS
T07031
Name
(GenBank) hypothetical protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fpho
Fluviibacter phosphoraccumulans
Pathway
fpho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fpho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHINM1_009000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpho03400
]
SHINM1_009000
Enzymes [BR:
fpho01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SHINM1_009000
DNA repair and recombination proteins [BR:
fpho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHINM1_009000
Prokaryotic type
SHINM1_009000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BCA65298
LinkDB
All DBs
Position
895875..896555
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AA seq
226 aa
AA seq
DB search
MSKSDDNQEKWLNEFLEATKGTEWVTKLTAFLGTKEQLRLLFPSDIEPDGSFTPTKGDDG
KRRVFEAFRLLSPIDVEYLVIGLDPYPDEKLATGVAFLVPEDSGKPTPPSLKHLTECLFP
KNEPNLVKWSQDNGVLLINAALTFPIGGKISGAHLPDWMEFTKAIIRFLKMTKPDIEIIA
LGKDAANVAKEALIRCCIHPAARGLSKDRFREDWGDYGPCKRGGKG
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagagtgacgacaatcaggaaaagtggctaaatgaatttctcgaggcgacaaaa
ggaaccgagtgggttacaaagctgaccgcgttcttaggtaccaaggagcaacttagattg
ctgttcccgtcggatattgagcctgatggttcgtttacgcctacgaaaggtgatgacggt
aagcgtcgcgtctttgaggcgtttcgactattgagtcctatcgacgtagagtaccttgtg
atcgggctagacccctatcccgatgagaagcttgcaacgggcgttgcctttttggtgccg
gaagacagtgggaagccgacgccgccaagccttaagcatctcacagagtgcctgttccca
aagaatgaacctaaccttgtgaaatggtctcaagacaatggggtgttactaatcaatgca
gccttaacatttccaataggtgggaaaatatcaggcgcgcatctcccagattggatggaa
ttcacgaaagcgataatccgattccttaaaatgacgaagccagatatagagataattgcc
ttgggtaaggatgcggcgaatgtagctaaagaggcgctaattagatgttgtatccacccc
gctgcaagaggcctcagcaaggataggttcagagaagactggggggactacggcccctgt
aaacgtggaggaaaaggctaa
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