Fluviibacter phosphoraccumulans: SHINM1_009590
Help
Entry
SHINM1_009590 CDS
T07031
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
fpho
Fluviibacter phosphoraccumulans
Pathway
fpho03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fpho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SHINM1_009590 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpho03400
]
SHINM1_009590 (uvrB)
DNA repair and recombination proteins [BR:
fpho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SHINM1_009590 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SHINM1_009590 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
UB2H
AAA_22
FlaG
Motif
Other DBs
NCBI-ProteinID:
BCA65357
LinkDB
All DBs
Position
955071..957167
Genome browser
AA seq
698 aa
AA seq
DB search
MTSASNTLTELASASAAKVVTFDGSPFRMHQPFPPAGDQPVAIEQLLAGLDDGLSFQTLL
GVTGSGKTYTMANVIARSGRPALVLAPNKTLAAQLYAEFKEFFPENAVEYFVSYYDYYQP
EAYVPSRDLFIEKDSSINEHIEQMRLSATKSLIERSDCIIVATVSCIYGIGDRDEYHQMI
MHVREGDKIHQRDLLKRLAEMQYSRNEMDFQRGTFRVRGDVIDVFPAEHAEHALRIELFD
DEVERLQLFDPLTGEIRQRLSRFTIYPSSHYVTPRATVLRALEGIKEELNVQRAAFLSEA
KLVEAQRLEQRTKFDIEMLNEVGFCKGIENYSRHLSGRNPGDPPPTLIDYLPDDALIFID
ESHVAIGQVGAMYKGDRSRKENLVNYGFRLPSALDNRPLKFDEFETKMRQTVFVSATPAA
YEKEHAGQVVEQVVRPTGLVDPVVEVRPATTQVDDLLVEIRKRVALDERILVTTLTKRMS
EDLTDYLTENGIKVRYLHSDIDTVERVEIIRDLRLGVFNVVVGINLLREGLDIPEVSLVA
ILDADKEGFLRSETSLIQTIGRAARHLNGTAILYADKITGSMRRAMDETERRRNKQVAFN
TKHGIVPRGVKKRIKDIIDGVYTTGYSDSNDAQAMRKAAQTRQRYETMSEKEVAAEIRKL
EQAMQQHAKNLEFEAAAQTRDQLFRLKEQLFGAAPKGD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgacttccgcttcgaataccctcaccgaactcgcttctgcctcagcagccaaggtcgtt
acctttgatggcagcccattccgcatgcatcagccgtttcctcccgccggggatcagccc
gtagcgattgagcaactgcttgctggtttggacgatggtctgtcgtttcagacattgctg
ggggtgaccggttcgggcaagacctacaccatggccaatgtgattgcccgcagtggccgt
ccggcactggtgctggctcccaataaaacattagccgcccagctatacgccgagtttaaa
gagttttttccggaaaacgcggttgagtatttcgtgtcttactatgactactatcagcca
gaagcctacgtgccgagtcgggatctctttattgaaaaggattcgtcgattaatgagcac
atcgagcagatgcgcctttcggcaactaagagtctgattgagcgctcggactgcattatt
gtggcaacggtttcctgcatttacggtattggtgatcgcgatgaatatcaccagatgatc
atgcatgtacgcgaaggggacaaaatccaccagcgtgacttgctgaaacgcttggccgaa
atgcagtacagccgcaatgaaatggattttcagcgcggtacgttccgggtgcgtggcgat
gtcatcgatgtattcccggcggagcatgccgagcacgcattacgtattgagttgtttgac
gatgaagtggagcgtttacagttgttcgacccgctgaccggcgagatccgccagcgactg
tcgcgttttacgatttacccctccagccattacgtaacaccgcgcgcaacagttctgcgg
gccctggaaggcattaaagaagagctgaacgtgcaacgtgcggcgtttctgtccgaagcc
aaactcgtcgaagcgcagcgcctggagcagcgaacgaaattcgatatcgaaatgctgaat
gaggttgggttctgcaaaggcattgaaaactattcgcgccacctatccggccgtaacccc
ggtgatccaccgccaacgctgattgattacctgccggacgacgccttgatctttatcgat
gaatcgcacgtggcgatcgggcaggtcggtgcaatgtataagggcgaccgttcacgtaaa
gagaatttggtgaattatggtttccgattgccttccgcactggataaccgcccccttaag
tttgatgaatttgaaacaaagatgcggcagacggtctttgtctcggcgacgccagccgct
tacgagaaagagcacgcagggcaggtggttgagcaggtggtgcgaccaacgggcttggtg
gatcccgttgttgaagtgcgtccagcgacgacacaggttgacgatttgctcgtagaaatc
cgtaagcgagtggcgctggatgaacgcattctggtcaccaccctgaccaagcgcatgtca
gaagacctaacggattacttgacagaaaacggcatcaaggtgcgttatttgcactcggat
attgacacggttgagcgggtcgagatcattcgagacttgcgcctgggtgtcttcaacgtc
gtggtcggcattaacttgttacgagaaggtctggatattccagaagtctccttggtggca
attctcgatgcggataaagaggggttcctgcgctcagaaacctcactgattcagaccatt
ggtcgggcggcgcgtcatctcaacggtacggcaattctgtatgccgataagattaccggt
tcgatgcgtcgggcgatggatgaaaccgagcggcgacgtaataaacaggtggcattcaat
acaaagcatggcatcgtgccacgtggggtcaagaaacgcatcaaagatattattgatggg
gtttacaccaccggatactctgattccaatgatgcacaggcgatgcgtaaggcagcacag
acgcgtcagcgctatgaaacgatgtcagagaaggaagtggctgcagaaatccgcaagctc
gaacaagccatgcagcagcatgccaagaacctggagttcgaggcggcggcacagacgcgg
gatcagttatttcgcttgaaggagcagttgtttggtgcggcgccgaagggcgattaa
DBGET
integrated database retrieval system