Fluviibacter phosphoraccumulans: SHINM1_009830
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Entry
SHINM1_009830 CDS
T07031
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
fpho
Fluviibacter phosphoraccumulans
Pathway
fpho03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fpho00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SHINM1_009830 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpho03019
]
SHINM1_009830 (rnc)
03009 Ribosome biogenesis [BR:
fpho03009
]
SHINM1_009830 (rnc)
03036 Chromosome and associated proteins [BR:
fpho03036
]
SHINM1_009830 (rnc)
Enzymes [BR:
fpho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SHINM1_009830 (rnc)
Messenger RNA biogenesis [BR:
fpho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SHINM1_009830 (rnc)
Ribosome biogenesis [BR:
fpho03009
]
Eukaryotic type
90S particles
RNase
SHINM1_009830 (rnc)
Prokaryotic type
rRNA processing factors
SHINM1_009830 (rnc)
Chromosome and associated proteins [BR:
fpho03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SHINM1_009830 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BCA65381
LinkDB
All DBs
Position
979202..979933
Genome browser
AA seq
243 aa
AA seq
DB search
MTPMGQRPPTAQRLLAGLESAIGYPFRDQHLLEQALTHRSYGRDHYERLEFLGDSILNAV
VAEALFQAFPELPEGDLSRLRANLVCQDQLVKVAGELSISRYLRLGEGELKSGGQHRPSI
LADTVEALYGAIWQEAGFETARRVILANFGQRISAIDLNQLPSAKDAKTRLQEWLQGRRL
PLPVYDAPKASGAAHAQSFEVVCRIAHHQIETRGHGPTRRAAEQQAAEIALTQLEAAQQD
KTQ
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgacacccatggggcagcgtccgcctacggcacagcgtctgctggccggattggaatcg
gcgattggctatccgtttcgtgatcagcacttgctggaacaggcgctcacccatcgtagt
tacggcagagatcattacgaacggctggaatttctgggggactccatcctcaacgccgtc
gtggctgaagcactgtttcaagcctttccagaattgcccgaaggggatttgtctcgtttg
cgggccaacctcgtttgccaggatcaactggtgaaggtggccggtgagctatcgatcagc
cggtatctgcgattgggcgagggtgaattaaagagtggcgggcagcatcgtccctctatc
ctggccgataccgtggaagcgctctatggcgccatctggcaagaagccggttttgaaaca
gcgcgccgcgtcattctggccaatttcgggcaacgcatcagcgcgattgatctgaaccag
ttgccctcggccaaagatgccaaaacgcggctgcaagaatggttgcaaggtcggcgtttg
ccattgccggtttatgatgcacccaaagccagcggcgcagcacatgcccagtcgtttgaa
gtcgtctgccgcatcgcccatcaccagatagaaacacgtggccatggcccgacgcgccgt
gcggccgaacagcaggccgctgaaatcgcgcttacgcaactagaagcggcccaacaggat
aaaacgcaatga
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