Fluviibacter phosphoraccumulans: SHINM1_010720
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Entry
SHINM1_010720 CDS
T07031
Name
(GenBank) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fpho
Fluviibacter phosphoraccumulans
Brite
KEGG Orthology (KO) [BR:
fpho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpho03016
]
SHINM1_010720
Enzymes [BR:
fpho01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SHINM1_010720
Transfer RNA biogenesis [BR:
fpho03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SHINM1_010720
Prokaryotic type
SHINM1_010720
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Ortholog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Glyco_hydro_20b
DUF1942
Motif
Other DBs
NCBI-ProteinID:
BCA65470
LinkDB
All DBs
Position
complement(1092291..1093295)
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AA seq
334 aa
AA seq
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MPLQDLPVIPRPDKWRNLDGVVLLDKPVGLTSNQALQAVRRLFAACKGGHTGTLDPFATG
VLPLCLGEATKFSADLLNADKTYLATVRFGQCTDTGDLTGTVTESTDQLPTLDQLHNILA
QFTGDSEQIPPMYSALKRDGQPLYKLARAGIEVERQPRKVHLQELAWSDIQTNEAGRVLT
ANLSVRCSKGTYIRTLAEDIAVAVASLAHLVALRRTQVGEITLTGCLTLGQLVTGVTQFT
VEGKQSSDLAFIRAGLLQPADFLVQNLPRLDISDQQAILCRHGNAFKPESGQSCKAESSV
RIYLADRLLGVGQVQGDGKDQKIQPVRLVSSSNS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttgccgttgcaggacttacccgttattccacggccagataagtggcggaatctagacggg
gttgtgttactggataagccggttggactgacctctaatcaagcgttgcaagcagttcgc
cgtttatttgctgcctgcaagggtggtcatactggcacgctggatccttttgctaccggc
gtattgcccctgtgtctgggtgaagctaccaagttttctgcagatttgctgaatgcggat
aaaacctatctggcgacagtacgtttcggtcagtgcactgataccggcgatctgaccggc
accgttaccgaatcaacagatcaactgcctacgctagatcagctgcacaacatcctggcg
caatttactggtgattccgagcaaatcccgccgatgtattccgcgctcaaacgcgatgga
cagccgctctacaaactggcgcgcgctggcattgaagtcgagcgccaaccgcgtaaagtg
catctgcaagaactggcctggtccgatattcaaaccaacgaagcgggtagggtgctcacc
gccaatctgtcggtgcgttgcagtaaaggcacgtatatccgtacgctggccgaagacatt
gccgttgctgtggctagccttgcacatctcgtggccttgcgccgtacacaagtgggtgag
ataacgctgaccggctgcctgacacttggacaactcgtcaccggggtgacgcaattcact
gttgaaggtaagcagtcgtctgatctggcgtttatccgggctggccttctgcaaccggcc
gattttttggtgcagaatctgccacgattggatatctctgatcaacaggcgattctgtgt
cgtcacggaaatgcttttaagccggagtctgggcaaagctgcaaagccgaatcttctgtg
cgtatctatctggcagatcggttgttgggtgtcgggcaggtgcagggggatggaaaagac
cagaaaattcagccggttcgtttggtgtcatcatcaaattcttga
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