Fluviibacter phosphoraccumulans: SHINM1_016620
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Entry
SHINM1_016620 CDS
T07031
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
fpho
Fluviibacter phosphoraccumulans
Brite
KEGG Orthology (KO) [BR:
fpho00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fpho01002
]
SHINM1_016620
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fpho01011
]
SHINM1_016620
Peptidases and inhibitors [BR:
fpho01002
]
Cysteine peptidases
Family C82
SHINM1_016620
Peptidoglycan biosynthesis and degradation proteins [BR:
fpho01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SHINM1_016620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
F420_ligase
Motif
Other DBs
NCBI-ProteinID:
BCA66060
LinkDB
All DBs
Position
complement(1689870..1691459)
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AA seq
529 aa
AA seq
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MWPWRRTLVLAACLFTLGWSLPSGAIAADDSVAWIVQGRPSALAQSAVQILEQAGDEGLN
PSDYDAAVLGHSVVAATKGKLLTAEQQTALNAAISQSLLRYLHDLHYGRVDPRSVYANFN
VAPKTLNLPATLNAAVAAGDLKQAVKAATPAFPLYQALKPWLARYRALEHNPAWVGNLPA
LPAQKLEPGVPYAGVALLTARLVSLGDLPADFVAPDRYQGPLVDGVKIFQKRHGLTEDGV
IGKTTFEQLNVKPAARVEQIALTMERLRWTPLMADKRVLVVNLPEFELRGLEIDGEAVQI
PLKMNVIVGKALNTRTPMFDEQMRAIEFSPYWNVPPSITRAETVPKLRRDPGYFDRQGFE
IVTRSGEVVTHLDETHLAALQNGQARIRQRPGAQNALGDIKFIFPNNDNIYMHHTPSVGL
FQRDRRDFSHGCIRVEAPVELAQFVLKDEPEWTAEKIREAMENGTSKTIRLKTPVMVVIA
YATAIVKQRGGTIYFYADIYGHDRQLRAALSQYSQRLQAQASHQSGNIL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtggccatggcgtcgaacgttagtacttgctgcctgtctgttcactttagggtggagc
ctgccatcaggcgcgatcgcggcggacgatagcgtcgcctggatcgtgcaaggacggccg
agcgccttggcgcagtctgccgttcagattctggaacaggcaggcgatgagggattaaac
ccctcagactacgatgctgcagtgcttgggcactcagtagtggcagcaaccaagggcaag
ctgttaacggcagagcaacagacggcgctcaatgccgctattagccagtcactgctgcgt
tacttgcatgatttacattacggccgtgttgatccaaggtcggtgtacgccaactttaat
gttgcgccaaagacacttaatttgccggcgacgctgaatgcagccgtggcagcgggcgac
ctgaagcaggctgttaaagcggctacgccggcttttccgttgtatcaggctttaaagcca
tggttggcgcgttatcgggctttggaacacaatccggcttgggtgggcaatctgccagca
ttgccagcacaaaagcttgaacccggggtgccttatgcaggggtcgccctattgactgca
cgtttagtatcgctgggtgatttgccggcagactttgttgcaccggatcgttatcaaggg
ccgttggtcgatggcgtcaagatttttcagaaacgacatggattaacagaggacggcgtg
atcggcaagacgacctttgagcagttgaatgtaaaacctgcggcgcgtgttgagcagatt
gccctgaccatggagcgcttgcgctggacgccgttaatggccgataagcgtgtcctggtg
gtgaacctgccggagttcgaattgcgtggtctggaaattgacggtgaggccgtgcagatt
ccgctcaaaatgaacgtgattgtgggtaaggcattaaatacccggacgccgatgtttgat
gagcaaatgcgggccattgagttcagcccgtactggaatgtcccaccctccattacccgg
gctgaaaccgtccccaagctgcggcgggacccgggttattttgatcggcagggctttgaa
attgtgacgcgttcgggtgaagtcgtgacgcatctcgacgagacgcacttggcggcttta
cagaatgggcaggcgcgcatccggcaacgcccgggggctcagaatgccctaggcgatatc
aagttcattttcccgaataacgacaacatctacatgcaccacacgccatcggtggggctg
tttcaaagagatcgccgtgactttagtcatggctgtattcgcgtagaagcaccggttgaa
ttagcgcaatttgtgctgaaagacgagccggaatggacggcggaaaaaattcgggaggcc
atggagaatgggacctctaaaaccattcgcctgaaaacaccagtcatggtggtgatcgcc
tatgccaccgctattgtgaaacagcggggtggcaccatttacttttatgccgacatttac
ggacatgaccgtcagctcagggcggcgttgtcacagtatagccagcgtcttcaggctcag
gcgtctcatcaatctggcaatatcctctga
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