Fluviibacter phosphoraccumulans: SHINM1_018760
Help
Entry
SHINM1_018760 CDS
T07031
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fpho
Fluviibacter phosphoraccumulans
Pathway
fpho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fpho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SHINM1_018760 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpho03021
]
SHINM1_018760 (rpoA)
03400 DNA repair and recombination proteins [BR:
fpho03400
]
SHINM1_018760 (rpoA)
Enzymes [BR:
fpho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SHINM1_018760 (rpoA)
Transcription machinery [BR:
fpho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SHINM1_018760 (rpoA)
DNA repair and recombination proteins [BR:
fpho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SHINM1_018760 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BCA66274
LinkDB
All DBs
Position
complement(1902468..1903445)
Genome browser
AA seq
325 aa
AA seq
DB search
MQGNALLKPRSIDVQTISPVHAKVVMEPFERGYGHTLGNALRRILLSSMEGYAPTEVKID
GVVHEYSTIDGVQEDVVDLLLNLKGVVFKLHSRNEVVVRVSKSGEGVVRASDIEVPHDVE
IINPDHVLAHIHAGGKLDMEIKVEKGRGYVPANQRKQAEEHKVIGHLMLDASFSPVRRVA
YSVDAARVEQRTDLDKLVMDIETDGVIDPEEAVRIAARILIDQMSLFADLEGTASGADGG
KSAPIDPVLLKPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEIK
DVLATRGLTLGMRLDNWPPAGLERN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaaatgcactattgaagccgcgcagcatcgatgtccagaccatctctccggtt
cacgccaaagtggtcatggaaccgttcgagcgtggttatggtcatacgctgggtaatgca
ctgcgccgcatcctgctgtcgtccatggaaggctacgcgccgaccgaagtcaagatcgac
ggtgtcgttcacgagtactcgacgatcgacggtgttcaggaagacgttgttgacctgctc
ctcaacctgaagggcgttgtgtttaaactacacagccgcaatgaggttgtggtccgtgtc
agcaagtcgggtgaaggcgttgtccgtgcttcggatatcgaagtgccgcacgacgttgaa
atcatcaatccggaccacgtgctggcgcacatccatgctggcggtaagctggacatggaa
atcaaggttgaaaaaggtcgtggctacgtccccgccaatcagcgcaagcaagccgaagag
cacaaggttattggccatctgatgctggatgccagcttcagcccagtgcgccgtgttgct
tactcggttgatgctgcccgtgttgaacagcgtaccgacctcgacaagttggtgatggat
attgaaacagacggtgtcattgatcctgaagaagccgtgcgcattgctgcacgcattctg
atcgatcagatgtcgctatttgcggaccttgaaggcaccgctagtggtgctgacggtggc
aagtcggcgccgatcgacccagttctgctcaagccggtcgacgaccttgagctgacggtg
cgttcggccaactgcctgaaggctgaaaatatctattacatcggcgacctgattcagcgt
accgaaaacgagctgctcaagaccccgaacctgggtcgcaagtcgctcaacgaaatcaag
gatgtgctcgcaacgcgcggactcaccttgggtatgcgcctcgacaactggccaccggcc
ggtctcgagcgcaactga
DBGET
integrated database retrieval system
