Fluviibacter phosphoraccumulans: SHINM1_019630
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Entry
SHINM1_019630 CDS
T07031
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-alpha
KO
K03530
DNA-binding protein HU-beta
Organism
fpho
Fluviibacter phosphoraccumulans
Brite
KEGG Orthology (KO) [BR:
fpho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpho03032
]
SHINM1_019630 (hupB)
03036 Chromosome and associated proteins [BR:
fpho03036
]
SHINM1_019630 (hupB)
03400 DNA repair and recombination proteins [BR:
fpho03400
]
SHINM1_019630 (hupB)
DNA replication proteins [BR:
fpho03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SHINM1_019630 (hupB)
Chromosome and associated proteins [BR:
fpho03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SHINM1_019630 (hupB)
DNA repair and recombination proteins [BR:
fpho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SHINM1_019630 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BCA66361
LinkDB
All DBs
Position
complement(1983380..1983661)
Genome browser
AA seq
93 aa
AA seq
DB search
MNKAELIEVIAKEAKLSKAAAQAALDATVAAVVKAVTKGDSVSLVGFGSFSSGKRAARTG
RNPQTGETIKIAAAKTVKFSAGKAFKDSVNKRK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagctgaactgattgaagtaatcgctaaagaagccaagctgagcaaggctgct
gcacaagccgctctggacgctactgttgctgccgttgttaaggctgtaaccaagggtgac
tcagtaagcctggttggttttggttcgttctcgagcggcaagcgcgctgcccgcaccggt
cgtaacccacaaactggtgaaaccatcaagattgctgctgccaagaccgttaagttctcg
gctggtaaggcattcaaggattccgtgaacaagcgtaagtaa
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