Fluviibacter phosphoraccumulans: SHINM1_019860
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Entry
SHINM1_019860 CDS
T07031
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
fpho
Fluviibacter phosphoraccumulans
Brite
KEGG Orthology (KO) [BR:
fpho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpho03400
]
SHINM1_019860
Enzymes [BR:
fpho01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
SHINM1_019860
DNA repair and recombination proteins [BR:
fpho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
SHINM1_019860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
NA-iREase3
Motif
Other DBs
NCBI-ProteinID:
BCA66384
LinkDB
All DBs
Position
complement(2002261..2003826)
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AA seq
521 aa
AA seq
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MTAHQKPRLFLVLGDQLHPDPHPLLTQAKPGDFVLMAEVPEESTHVWSHKARTALFFSAM
RHFAAHQQSIGRVIDYWRIGTHDGTSLAAVVHKFVAQHPDISALYLLEPGDQRVLAAMQT
CAHTLGLPLNITPDPHFLCSLDDFNHWAARSDKAGRDSLRMEFFYRWMRQRTGILMEAGQ
PIGGQWNFDAENRNGFGAGGPPPVPQAKRFAPDALTQEACADVSRYFPDHPGSLASFGWP
VTPQEALEALDDFITQRLPEFGRWQDAMWQGEAFLWHSLISAALNLKLLDPRGVIARAET
ALASDKAPLAAVEGFIRQILGWREFVRGVYWRYASQWPSLNFLSAQRPLPGWYWTGKTQA
ACLKEAISQTLTHGYAHHIQRLMVTGNFALLAGVNPRQVADWYLAVYVDAVDWVEEPNTL
GMALFALGPRMTSKPYIASGAYIKRMSNACKQCVYKPDIRTGPQACPYTTLYWYFLMQHA
DLLRKNPRMALAYKNLDRMADVERTAISEWAEVRLQNLEAL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgacagctcaccagaagccacgcttatttctggtgctcggcgatcagctccacccagat
ccacatccgttattgacacaggcaaagcctggcgacttcgtcctcatggccgaggtgccg
gaagagtccacccacgtgtggagtcataaggcccgcacggcgctcttcttttcggccatg
cggcacttcgcagcgcatcaacaatctattgggcgcgtcattgattactggcgaatcggc
acgcatgacggcacctctctggcggcggtggtgcataagtttgtcgcacaacatccagat
atttcagcgttgtacttgttggagccgggcgatcagcgcgtgctggcagccatgcagacc
tgtgctcacacgctcggcctcccgttgaacattacgcctgatccgcattttctatgcagt
ctggatgactttaatcactgggcggcgcgcagcgataaggcgggcagagacagtttacgc
atggagtttttctatcgctggatgcggcaacgcacgggcatcctcatggaagcgggtcaa
cctattggcggccagtggaatttcgatgccgaaaaccgcaacggttttggtgccggcggc
ccacccccggtgccccaggccaaacgttttgcgccagatgcgttgacgcaggaagcctgt
gccgatgtgtcccgctacttccctgatcatccgggtagcctggcgtcatttggctggccg
gtcacgccacaagaggcattagaggcgctggatgatttcatcacgcagcgattgcctgag
tttgggcgctggcaggatgccatgtggcagggcgaggccttcctctggcattcgctgatt
tctgcggcgctaaatttaaagctcctcgatccacggggtgtgatcgcacgcgccgaaaca
gcgctggcttctgacaaagcaccgctagcggcagtagaaggttttatccggcagattctg
ggttggcgtgaatttgtgcggggtgtgtactggcgctatgccagtcaatggccgagcctt
aatttcctgagtgcacagcgcccgttgcccggctggtactggacgggtaaaacgcaagcg
gcttgtttgaaggaagccattagccagacgttaacccatggctacgcacaccacatacaa
cgcctgatggtgactggcaattttgccttgctggccggtgtgaacccgcggcaggtggcg
gattggtatctggctgtttatgtggatgccgttgactgggtagaagagcctaatacctta
ggcatggccctctttgccctggggccacgcatgaccagcaagccttatattgcctctggt
gcgtatatcaagcggatgagtaatgcctgtaagcagtgcgtgtacaaaccagacatacga
accggcccacaggcctgtccttacaccacgctatattggtatttcctcatgcagcatgca
gacctgcttcggaagaatccgcgtatggcgctggcgtataaaaatctggatcgtatggcc
gacgttgagcgaaccgccatcagtgagtgggccgaggttcgtttgcaaaacctggaagcg
ctttag
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