Entry |
|
Name |
(GenBank) pseudouridine synthase
|
KO |
|
Organism |
fpho Fluviibacter phosphoraccumulans
|
Brite |
KEGG Orthology (KO) [BR:fpho00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:fpho03009]
SHINM1_020210
Enzymes [BR:fpho01000]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
SHINM1_020210
Ribosome biogenesis [BR:fpho03009]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SHINM1_020210
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(2044045..2044782)
|
AA seq |
245 aa
MNKPARPLSIERILQNQGFGARKLCRILIRNGAVTVNGNRCEDPDETFATEGLVLEVEGV
EGVWPFCNNAYILLNKPVGYECSRAPKHHPSVLSLLPDPLRARDVQPVGRLDVETTGLLL
LTDDGQCIHVLTSPKHAVPKVYRATLAEAADQSLCDKLLAGVLLKDEEETIAADACKLLE
PQILEMTITQGKYHQVRRMIAAAGNHVNALERTAIGDLHLAADLAPGEWQWLDAGSMLKA
GWSPR |
NT seq |
738 nt +upstreamnt +downstreamnt
atgaataaacccgcccgacccctaagtattgagcgtattttgcaaaaccagggcttcggt
gctcgtaagctctgccgcattctcatacgcaatggcgctgttacggttaatggcaaccgc
tgcgaagatccggacgaaacctttgccaccgaaggtcttgtcctggaagttgaaggggtc
gagggcgtctggccgttttgtaataacgcttacatcttactcaacaaacccgtgggctac
gaatgttcgcgggcacccaagcatcaccccagcgttctgtctttattgccggatccgttg
cgtgcccgtgacgtacagcctgtcggtcgcttggatgtagaaaccaccgggttattgttg
ttaacggatgatggtcagtgcatccatgtactcacctcacccaaacatgcggtgcccaaa
gtctatcgggcaacgttggcggaagcggctgatcagagcttgtgcgacaaactgctggct
ggcgtgctgctgaaagacgaagaagagaccatcgcggctgatgcttgtaaattgctagaa
ccgcagattctggaaatgactattacccagggtaagtaccatcaggtgcggcgcatgatc
gccgccgcaggtaatcatgtaaacgcactagaaagaacggcaatcggcgatctgcatctg
gcggccgacctggccccgggtgagtggcaatggcttgatgccggtagtatgcttaaggca
ggttggtctccccgataa |