Fluviibacter phosphoraccumulans: SHINM1_020220
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Entry
SHINM1_020220 CDS
T07031
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
fpho
Fluviibacter phosphoraccumulans
Brite
KEGG Orthology (KO) [BR:
fpho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpho03032
]
SHINM1_020220 (gyrB)
03400 DNA repair and recombination proteins [BR:
fpho03400
]
SHINM1_020220 (gyrB)
Enzymes [BR:
fpho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SHINM1_020220 (gyrB)
DNA replication proteins [BR:
fpho03032
]
Prokaryotic type
DNA Topoisomerases
SHINM1_020220 (gyrB)
DNA repair and recombination proteins [BR:
fpho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SHINM1_020220 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BCA66420
UniProt:
A0A679I779
LinkDB
All DBs
Position
complement(2044902..2047394)
Genome browser
AA seq
830 aa
AA seq
DB search
MADKKPTQAPEYDESSIQQLEGLEAVRKRPGMYIGDTSDGSGLHHMVFEVVDNGIDEALA
GYCDDIVVTIHSDNSISVKDNGRGIPTGIKFDDKHEPKRSAAEIVMCVLHAGGKFNQNSY
KVSGGLHGVGVSCVNALSQWLKLIIRRDGKKYFMEFNQGKPVNRVIEMQNGVEVSPMAVI
GETENRGTEVHFLADPEIFGTVEFHYEILAKRLRELSFLNNGVSVRLVDQRTGKEEDFAF
SGGVKGFVDYINKNKTILHPNVFYSTGETQAGEATISVEVAMQWNDSYSENVLCFTNNIP
QSDGGTHLTGLRAAMTRVINKYIEENDIAKKAKVDITGDDMREGLTCVLSVKMPDPKFAS
QTKMKLVSSEARPAVEEVVAQKLSEFLLERPADAKVITGKIVEAARARDAARKAREMTRR
KSVLDGVGLPGKLADCQEKDPSKCELYLVEGDSAGGSAKQGRDRKFQAILPLKGKILNVE
KARFDKLIGSQEIATLITALGTGIGKDEYKPEKLRYHRIIIMTDADVDGAHIRTLLLTFF
YRQMPELVERGHIYIAQPPLYKVKHGKTERYLKDDHEYHQFLLQMALNEAKLQPAKGNAI
EGEALADLARSFLLSEAIIDRLSYLIHPEVLHTLVNDNLSISLTDEKAAQSAANELTKAL
GLGPVRASHEKPLEIVPAYDANRESWVLRLERWHHGNLKLGLIDNEFLNSGDYTQLRKTA
ELLADLTSGGAVIHRGDKQQAVSRFSEAMQWLFGEVERGIGKQRYKGLGEMNPEQLWETT
MDPNVRRLLKVQIEDAIGADQIFSTLMGELVEPRRAFIETNALTARNIDA
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggccgataagaaacctacgcaagcacccgaatacgacgaatcctcgatccagcagctg
gaaggcctggaggctgttcgcaaacggccgggcatgtacatcggtgatacctccgatggc
agtggcctgcatcacatggtgtttgaagtcgttgataacggtattgatgaagcgttggcc
ggttactgcgatgacatcgtcgtgaccattcatagcgataattcgatctcggttaaagat
aacggccgcggtattccgacaggcatcaaattcgacgataagcacgagccgaaacgttcg
gccgctgaaatcgtgatgtgcgtattgcacgcaggtggtaagttcaaccagaatagctac
aaggtgtctggtggtctgcacggcgtaggtgtgtcgtgtgttaacgccctatcgcaatgg
cttaagctcatcattcgtcgtgatggcaaaaagtatttcatggagtttaatcaaggtaag
ccggttaatcgcgttatcgaaatgcagaacggtgttgaagtttcgcctatggctgtgatc
ggcgaaacagaaaaccgcggtacggaagtgcactttctggctgatccagaaatttttggc
acggttgaattccattacgaaattctggccaagcgtctgcgtgaattgtcgttcctgaac
aacggcgtcagcgtgcgtctggtcgatcagcgtaccggcaaagaagaagactttgctttc
tcgggtggcgtgaagggctttgttgattacatcaacaaaaacaaaaccatcctgcatccg
aacgtgttttattcgacgggtgaaacccaggccggtgaagccacgatttctgttgaagtc
gccatgcaatggaacgactcctactcggaaaacgttctgtgctttaccaataacattccg
cagtcggatgggggtacccaccttaccggcctgcgtgcggccatgactcgcgtcatcaac
aagtacatcgaagaaaacgacatcgccaaaaaggccaaggtcgacatcactggtgatgat
atgcgcgaaggtctcacctgcgtgctgtcggtaaaaatgccagatccgaagtttgcctcg
caaaccaagatgaagctcgtctcgtccgaagcccgtccggcggtggaagaagtggtagcg
cagaagttatctgaattcttgctggagcgtccggccgatgccaaggtgattaccggcaag
atcgtagaagcggcccgtgcccgtgacgcggcccgtaaagcacgtgaaatgacgcgtcgt
aagagcgtgctcgacggcgtgggtctgcccggcaaactggcagactgccaggaaaaagat
ccgagtaaatgtgaactgtacctagtggagggtgactccgccggcggttctgccaagcag
ggtcgtgatcgtaagttccaggctattttgccgctgaagggcaaaattcttaacgtagaa
aaagcgcgttttgacaagctcatcggctcacaggaaattgccacgctgattaccgccctc
ggtaccggcattggcaaagacgaatacaaaccggaaaaactccgctaccaccgcatcatt
atcatgaccgatgccgacgttgatggtgcacacatccgtaccctactcctgacctttttc
tatcgtcagatgccggaattggttgagcgtggccacatctatattgctcagccgccccta
tacaaggtcaagcacggcaagaccgagcgttatcttaaggatgaccacgaataccatcag
ttcctgctgcaaatggcgttaaatgaagccaaactgcaaccggccaagggtaatgctatc
gaaggtgaagcactggctgatctggcccgcagcttcctgctgtccgaggcgatcattgac
cgcttgtcgtatttgattcatccggaagtgctgcataccctggtcaacgataacctctcg
attagcctgaccgacgagaaggccgctcagagcgccgcaaatgaactgactaaggcccta
ggcttaggaccggtccgcgcgtcgcatgagaagcctctggagatcgttcctgcctatgat
gcgaatcgcgagagttgggttctgcgtctcgaacgttggcatcacggcaatcttaagctc
ggtttgatcgataacgagttcctcaactcgggcgattacacgcagttgcgtaagaccgcc
gaattgctggcggatctgactagcggtggggccgtgattcaccgtggtgacaaacaacag
gccgtttctcgtttcagtgaagccatgcagtggttgtttggtgaagtcgaacgtggcatt
ggtaagcagcgctacaaaggcctgggtgaaatgaatccggagcaattgtgggaaaccacc
atggatccgaatgtccgtcgcctgctcaaggtgcagatcgaagacgctattggtgcggac
cagattttctctacgctcatgggtgaactggtggagccgcgtcgggcctttatcgaaacc
aatgcacttacggcgcgcaacatcgacgcctaa
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