Fluviibacter phosphoraccumulans: SHINM1_021900
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Entry
SHINM1_021900 CDS
T07031
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fpho
Fluviibacter phosphoraccumulans
Brite
KEGG Orthology (KO) [BR:
fpho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpho03400
]
SHINM1_021900
Enzymes [BR:
fpho01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SHINM1_021900
DNA repair and recombination proteins [BR:
fpho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SHINM1_021900
Prokaryotic type
SHINM1_021900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BCA66588
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Position
complement(2214177..2215628)
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AA seq
483 aa
AA seq
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MNSQHPDTQPALVWLRRDLRLDDQAALYHTLKQHSRVYVTFIFDRDILDQLPRQDRRVEF
IRESLVELDHRLREHGGALIVRHGWPRETIPALAKALGVSDVYCNRDYEPNAVLRDRDVA
QTLSIDQIGFHSYKDQTIFEQDEVLTQMGKPFTVFTPYKNAWYKKAGLSDTDFFVRPYPV
TRYLQHLAPTALATGVPTLADLGFETTDLQKIGIMPGITGGRERIEDFFTRIQNYKVARD
FPAIKGVSYLSVHLRFGTISIRELAARAWREGGEGALGWLNELIWRDFYFAILHHFPHAI
GHAFKPAFDAIAWDDNPDWHQAWCEGRTGYPLVDAAQRQLAQTGWMHNRLRMVSASFYTK
DLGLDWRQGEAWFAKLLLDFDLSANNGGWQWSSSTGCDAQPWFRIFNPVTQSERFDPKGK
FIRRYVPELAHVPDKYIHAPWTMPAETQANCGVLIGRDYPAPIVDHGEARQRTLARFKAA
TSE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaacagccaacaccccgatacgcaaccggcgcttgtctggttaagacgagacctgcgg
cttgatgatcaggccgccctttaccataccttaaagcagcacagccgcgtttatgtgacc
tttatcttcgaccgagacattctggatcaattaccccgtcaggatcgccgcgtggaattt
atccgggagtccctcgttgagctggatcaccggcttcgcgaacatggtggtgcgctcatt
gtgcgccacggttggccgcgtgaaaccattcccgctttggctaaggcgctcggcgtcagt
gacgtctattgcaaccgggactacgagcccaacgccgttctacgtgatcgagatgtggcg
cagacgctgagcatcgatcagattggctttcacagctataaagatcagacgattttcgag
caggatgaagtgctcacccaaatgggtaagccttttactgtatttaccccctacaagaat
gcttggtacaaaaaagccgggctatctgatacagatttctttgtgcgcccttacccggtc
acacgctatttgcagcatcttgctccaacggctctagccaccggcgtcccgacactggcc
gacttgggttttgaaaccacagatctgcaaaaaatcggcatcatgccgggcatcacgggt
ggccgtgaacggatcgaagatttcttcacccgcatccaaaactataaagtggctcgtgac
ttccccgccatcaaaggcgtgtcctatctgtccgtgcatctgcgttttggcacgatctca
atccgcgaactggccgcgcgcgcctggcgcgagggtggtgaaggcgccttgggctggctc
aacgaactgatctggcgggatttctatttcgcgatcctgcatcacttcccgcatgccatt
ggccatgctttcaaacccgccttcgatgcgattgcctgggacgacaacccggactggcat
caagcctggtgcgaggggcgtaccggatacccgctggttgatgccgcccagcgccaactg
gctcaaaccggctggatgcacaatcgcctgcgcatggtgagcgcctcgttctacaccaaa
gatctggggctggattggcgacagggcgaagcctggttcgccaaactattgctggatttt
gatctgtcggccaataacggcggctggcagtggtcgtcttctaccggctgtgatgctcaa
ccctggttccggatttttaatccggtcacgcagtccgagcgcttcgatccaaagggcaag
ttcatccgccgctatgtgccggaacttgcccacgtacccgataaatacatccacgccccg
tggaccatgcccgccgagacccaagcgaattgcggcgtgttaatcggccgcgattatcca
gcgccgattgttgatcatggcgaggcacggcaacgaactttagcccgcttcaaggcagct
acgagcgaatga
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